NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL11078 Query DataSets for GPL11078
Status Public on Apr 13, 2011
Title [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [CDF: MoGene10stv1_Mm_ENTREZG_13]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
This is identical to GPL6246 but a custom cdf environment was used to extract data. ANNOTATION: chip library files are provided as supplementary files below, and can be downloaded at: http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp as Package name mogene10stv1mmentrezg. vers13 july 6 2010.
 
 
Submission date Oct 20, 2010
Last update date Apr 13, 2011
Contact name Kristine Williams
E-mail(s) kristine.williams@bric.dk
Organization name University of Copenhagen
Department BRIC
Lab Helin
Street address Ole Maaløes vej 5
City Copenhagen
ZIP/Postal code 2200
Country Denmark
 
Samples (125) GSM611209, GSM611210, GSM611211, GSM611212, GSM611213, GSM611214 
Series (14)
GSE24842 Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity (Affymetrix gene expression data)
GSE24843 Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity
GSE29551 Expression data from 6 day-old Atxn1L-/- and Atxn1-/- lung tissues
Relations
Alternative to GPL6246 (Alternative CDF [official])

Data table header descriptions
ID
Name Gene Name
GB_LIST RefSeq Accession list
SPOT_ID spot identifier

Data table
ID Name GB_LIST SPOT_ID
100009600_at Zglp1 NM_001103168, XM_001475156, XM_001475715
100009609_at Vmn2r65 NM_001105180, XM_001472549, XM_001479094
100012_at Oog3 NM_201258
100017_at Ldlrap1 NM_145554
100019_at Mdn1 NM_001081392
100033459_at E430029J22Rik NM_001162938, XR_035320, XR_035462
100034251_at Gm11428 NM_001081957
100036521_at Gm16039 XM_001474303, XM_001475330
100037258_at Dnajc3 NM_008929
100037278_at Fam129c NM_001166213, XM_001478428, XM_001478599
100038380_at Gm10837 XM_001481061
100038429_at Gm10505 XM_001472841, XM_001478670, XM_001479286
100038486_at Gm10742 XM_001474096
100038570_at Gm11744 NM_001163318, XM_001476103, XM_001477353
100038598_at Gm10386 XM_001477259, XM_001478669
100038600_at Gm11529 XM_001475433
100038618_at Gm10847 XM_001479678, XM_001480848
100038635_at Gm10621 XM_001475386, XM_001476249
100038680_at Gm1971 XM_001472879
100038683_at Gm10775 XM_001473066, XM_001478312

Total number of rows: 21212

Table truncated, full table size 681 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL11078_MoGene10stv1_Mm_ENTREZG.cdf.gz 8.9 Mb (ftp)(http) CDF
GPL11078_MoGene10stv1_Mm_ENTREZG_desc.txt.gz 245.4 Kb (ftp)(http) TXT
GPL11078_MoGene10stv1_Mm_ENTREZG_mapping.txt.gz 4.6 Mb (ftp)(http) TXT
GPL11078_MoGene10stv1_Mm_ENTREZG_probe_tab.txt.gz 8.0 Mb (ftp)(http) TXT

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap