GEO help: Mouse over screen elements for information.
Status
Public on Jul 28, 2010
Title
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [probe set (exon) version]
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's web site
Description
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html
Submission date
Jul 28, 2010
Last update date
Jan 25, 2019
Organization
Affymetrix, Inc.
E-mail(s)
geo@ncbi.nlm.nih.gov, support@affymetrix.com Phone
888-362-2447
URL
http://www.affymetrix.com/index.affx Street address
City
Santa Clara
State/province
CA
ZIP/Postal code
95051
Country
USA
Samples (664)
GSM572410 , GSM572411 , GSM572412 , GSM572413 , GSM572414 , GSM572415
GSM572416 ,
GSM572417 ,
GSM572418 ,
GSM572419 ,
GSM572420 ,
GSM572421 ,
GSM658287 ,
GSM658288 ,
GSM658289 ,
GSM658290 ,
GSM658291 ,
GSM658292 ,
GSM658293 ,
GSM658294 ,
GSM658295 ,
GSM658296 ,
GSM743740 ,
GSM743741 ,
GSM743742 ,
GSM743743 ,
GSM743744 ,
GSM743745 ,
GSM743746 ,
GSM743747 ,
GSM747185 ,
GSM747186 ,
GSM747187 ,
GSM747188 ,
GSM747189 ,
GSM747190 ,
GSM747191 ,
GSM747192 ,
GSM747193 ,
GSM747194 ,
GSM747195 ,
GSM747196 ,
GSM747197 ,
GSM747198 ,
GSM747199 ,
GSM747200 ,
GSM747201 ,
GSM747202 ,
GSM767802 ,
GSM767803 ,
GSM767804 ,
GSM767805 ,
GSM824898 ,
GSM824899 ,
GSM824900 ,
GSM824901 ,
GSM824902 ,
GSM824903 ,
GSM824904 ,
GSM824905 ,
GSM824906 ,
GSM824907 ,
GSM831854 ,
GSM831855 ,
GSM831856 ,
GSM831857 ,
GSM831858 ,
GSM831859 ,
GSM846202 ,
GSM846203 ,
GSM846204 ,
GSM846205 ,
GSM846206 ,
GSM846207 ,
GSM846208 ,
GSM846209 ,
GSM846210 ,
GSM846211 ,
GSM846212 ,
GSM846213 ,
GSM851019 ,
GSM851020 ,
GSM851021 ,
GSM851022 ,
GSM851023 ,
GSM851024 ,
GSM851025 ,
GSM851026 ,
GSM851027 ,
GSM851028 ,
GSM851029 ,
GSM851030 ,
GSM851031 ,
GSM851032 ,
GSM851033 ,
GSM851034 ,
GSM864079 ,
GSM864080 ,
GSM864081 ,
GSM864082 ,
GSM864083 ,
GSM864084 ,
GSM864085 ,
GSM864086 ,
GSM868988 ,
GSM868989 ,
GSM868990 ,
GSM868991 ,
GSM868992 ,
GSM868993 ,
GSM868994 ,
GSM868995 ,
GSM868996 ,
GSM920919 ,
GSM920920 ,
GSM920921 ,
GSM920922 ,
GSM920923 ,
GSM920924 ,
GSM920925 ,
GSM920926 ,
GSM920927 ,
GSM920928 ,
GSM920929 ,
GSM920930 ,
GSM920931 ,
GSM947590 ,
GSM947591 ,
GSM947592 ,
GSM947593 ,
GSM947594 ,
GSM947595 ,
GSM958183 ,
GSM958184 ,
GSM958185 ,
GSM982314 ,
GSM982315 ,
GSM982316 ,
GSM982317 ,
GSM982318 ,
GSM982319 ,
GSM982320 ,
GSM982321 ,
GSM982322 ,
GSM982323 ,
GSM982324 ,
GSM982325 ,
GSM982326 ,
GSM982327 ,
GSM999604 ,
GSM999605 ,
GSM1079548 ,
GSM1079549 ,
GSM1079550 ,
GSM1079551 ,
GSM1079552 ,
GSM1079553 ,
GSM1079554 ,
GSM1079555 ,
GSM1079556 ,
GSM1079557 ,
GSM1079558 ,
GSM1079559 ,
GSM1079560 ,
GSM1079561 ,
GSM1089647 ,
GSM1089648 ,
GSM1089649 ,
GSM1089650 ,
GSM1089651 ,
GSM1089652 ,
GSM1126120 ,
GSM1126121 ,
GSM1126122 ,
GSM1126123 ,
GSM1126124 ,
GSM1126125 ,
GSM1180553 ,
GSM1180554 ,
GSM1180555 ,
GSM1180556 ,
GSM1180557 ,
GSM1180558 ,
GSM1180559 ,
GSM1180560 ,
GSM1180561 ,
GSM1180562 ,
GSM1180563 ,
GSM1180564 ,
GSM1194050 ,
GSM1194051 ,
GSM1194052 ,
GSM1194053 ,
GSM1194054 ,
GSM1194055 ,
GSM1238976 ,
GSM1238977 ,
GSM1238978 ,
GSM1238979 ,
GSM1238980 ,
GSM1238981 ,
GSM1249704 ,
GSM1249705 ,
GSM1249706 ,
GSM1249707 ,
GSM1249708 ,
GSM1249709 ,
GSM1249710 ,
GSM1249711 ,
GSM1249712 ,
GSM1249713 ,
GSM1249714 ,
GSM1249715 ,
GSM1253466 ,
GSM1253467 ,
GSM1253468 ,
GSM1253469 ,
GSM1253470 ,
GSM1253471 ,
GSM1347703 ,
GSM1347704 ,
GSM1347705 ,
GSM1347706 ,
GSM1347707 ,
GSM1347708 ,
GSM1347709 ,
GSM1347710 ,
GSM1347711 ,
GSM1357324 ,
GSM1357325 ,
GSM1357326 ,
GSM1357327 ,
GSM1357328 ,
GSM1357329 ,
GSM1363396 ,
GSM1363397 ,
GSM1363398 ,
GSM1363399 ,
GSM1363400 ,
GSM1363401 ,
GSM1363402 ,
GSM1363403 ,
GSM1363404 ,
GSM1363405 ,
GSM1363406 ,
GSM1363407 ,
GSM1363408 ,
GSM1363409 ,
GSM1363410 ,
GSM1363411 ,
GSM1365195 ,
GSM1365196 ,
GSM1365197 ,
GSM1365198 ,
GSM1365199 ,
GSM1365200 ,
GSM1365201 ,
GSM1365202 ,
GSM1365203 ,
GSM1365204 ,
GSM1365205 ,
GSM1365206 ,
GSM1365207 ,
GSM1365208 ,
GSM1365209 ,
GSM1365210 ,
GSM1365211 ,
GSM1365212 ,
GSM1365213 ,
GSM1365214 ,
GSM1365215 ,
GSM1365216 ,
GSM1365217 ,
GSM1365218 ,
GSM1365219 ,
GSM1365220 ,
GSM1365221 ,
GSM1365222 ,
GSM1365223 ,
GSM1365224 ,
GSM1365225 ,
GSM1365226 ,
GSM1365227 ,
GSM1365228 ,
GSM1365229 ,
GSM1365230 ,
GSM1365231 ,
GSM1365232 ,
GSM1365233 ,
GSM1365234 ,
GSM1365235 ,
GSM1365236 ,
GSM1365237 ,
GSM1365238 ,
GSM1484401 ,
GSM1484402 ,
GSM1484403 ,
GSM1484404 ,
GSM1484405 ,
GSM1484406 ,
GSM1484407 ,
GSM1484408 ,
GSM1484409 ,
GSM1484410 ,
GSM1484411 ,
GSM1484412 ,
GSM1484413 ,
GSM1484414 ,
GSM1484415 ,
GSM1484416 ,
GSM1484417 ,
GSM1484418 ,
GSM1484419 ,
GSM1484420 ,
GSM1484421 ,
GSM1484422 ,
GSM1484423 ,
GSM1484424 ,
GSM1484425 ,
GSM1484426 ,
GSM1484427 ,
GSM1484428 ,
GSM1484429 ,
GSM1484430 ,
GSM1484431 ,
GSM1484432 ,
GSM1484433 ,
GSM1484434 ,
GSM1484435 ,
GSM1484436 ,
GSM1495433 ,
GSM1495434 ,
GSM1495435 ,
GSM1517155 ,
GSM1517156 ,
GSM1517157 ,
GSM1517158 ,
GSM1517159 ,
GSM1517160 ,
GSM1517161 ,
GSM1517162 ,
GSM1517163 ,
GSM1517164 ,
GSM1517165 ,
GSM1517166 ,
GSM1517167 ,
GSM1517168 ,
GSM1517169 ,
GSM1517170 ,
GSM1517171 ,
GSM1517172 ,
GSM1517173 ,
GSM1517174 ,
GSM1547785 ,
GSM1547786 ,
GSM1547787 ,
GSM1547788 ,
GSM1547789 ,
GSM1547790 ,
GSM1547791 ,
GSM1547792 ,
GSM1547793 ,
GSM1562231 ,
GSM1562232 ,
GSM1562233 ,
GSM1562234 ,
GSM1584943 ,
GSM1584944 ,
GSM1584945 ,
GSM1584946 ,
GSM1584947 ,
GSM1584948 ,
GSM1584949 ,
GSM1584950 ,
GSM1584951 ,
GSM1584952 ,
GSM1584953 ,
GSM1584954 ,
GSM1584955 ,
GSM1584956 ,
GSM1584957 ,
GSM1584958 ,
GSM1584959 ,
GSM1584960 ,
GSM1584961 ,
GSM1584962 ,
GSM1584963 ,
GSM1584964 ,
GSM1584965 ,
GSM1584966 ,
GSM1584967 ,
GSM1584968 ,
GSM1584969 ,
GSM1584970 ,
GSM1584971 ,
GSM1584972 ,
GSM1584973 ,
GSM1584974 ,
GSM1584975 ,
GSM1584976 ,
GSM1584977 ,
GSM1584978 ,
GSM1584979 ,
GSM1584980 ,
GSM1584981 ,
GSM1584982 ,
GSM1584983 ,
GSM1584984 ,
GSM1584985 ,
GSM1584986 ,
GSM1584987 ,
GSM1584988 ,
GSM1584989 ,
GSM1584990 ,
GSM1584991 ,
GSM1584992 ,
GSM1584993 ,
GSM1584994 ,
GSM1584995 ,
GSM1584996 ,
GSM1584997 ,
GSM1626589 ,
GSM1626590 ,
GSM1626591 ,
GSM1626592 ,
GSM1626593 ,
GSM1626594 ,
GSM1626595 ,
GSM1626596 ,
GSM1626597 ,
GSM1626598 ,
GSM1892482 ,
GSM1892483 ,
GSM1892484 ,
GSM1892485 ,
GSM1892486 ,
GSM1892487 ,
GSM1892488 ,
GSM1892489 ,
GSM1892490 ,
GSM1892491 ,
GSM1892492 ,
GSM1892493 ,
GSM1892494 ,
GSM1892495 ,
GSM1892496 ,
GSM1892497 ,
GSM1892498 ,
GSM1892499 ,
GSM1892500 ,
GSM1892501 ,
GSM1892502 ,
GSM1892503 ,
GSM1892504 ,
GSM1892505 ,
GSM1892506 ,
GSM1892507 ,
GSM1892508 ,
GSM1892509 ,
GSM1892510 ,
GSM1892511 ,
GSM1892512 ,
GSM1892513 ,
GSM1892514 ,
GSM1892515 ,
GSM1892516 ,
GSM1892517 ,
GSM1892518 ,
GSM1892519 ,
GSM1892520 ,
GSM1892521 ,
GSM1892522 ,
GSM1892523 ,
GSM1892524 ,
GSM1892525 ,
GSM1892526 ,
GSM1892527 ,
GSM2028142 ,
GSM2028143 ,
GSM2028144 ,
GSM2028145 ,
GSM2028146 ,
GSM2028147 ,
GSM2200153 ,
GSM2200154 ,
GSM2200155 ,
GSM2200156 ,
GSM2200157 ,
GSM2200158 ,
GSM2200159 ,
GSM2200160 ,
GSM2200161 ,
GSM2200162 ,
GSM2228891 ,
GSM2228892 ,
GSM2228893 ,
GSM2228894 ,
GSM2228895 ,
GSM2228896 ,
GSM2350221 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (57)
GSE23321 Expression data from human naïve (TN), stem cell memory (TSCM), central memory (TCM) and effector memory (TEM) CD8+ T cells
GSE26747 Gene expression analysis of dendritic cells from normal or tumor sections of human prostates
GSE30040 Expression data from feline liver tissue
GSE30177 Complement protein C1q modulates macrophage activation and inflammasome activity during the uptake of apoptotic cells
GSE30982 Primary human nasal cells extracted from current smokers treated with kaempferol
GSE33350 Comparison of metastatic derivatives of colon cancer cell line selected in vivo
GSE33631 Expression data from mock treated/oxidized HF after 24h incubation with/without monocytes
GSE34276 Global analysis of TGF-beta-regulated gene expression in MCF10Ca1h (M3) breast tumor xenografts
GSE34277 MCF10A-based xenograft model of breast cancer
GSE34559 Tie-2 expressing monocytes (TEM) expression data
GSE35224 Gene expression profiling of Hodgkin Lymphoma cell line following REL-B depletion
GSE35461 Expression profile of human ESC, ESC-drived definitive endoderm and endodermal progenitor cells
GSE37517 Expression data from human induced pluripotent stem cell derived NSCs and striatal-like cells
GSE38690 The ERRalpha metabolic nuclear receptor controls growth of colon cancer cells
GSE39208 Expression data from asynchronous HUH7 cells
GSE39243 Expression and FoxA1 binding in asynchronous and mitotic HUH7 cells
GSE39961 Distinct signal transduction pathways downstream of the (P)RR revealed by microarray and ChIP-chip analyses [Expt: PLZF_HEK]
GSE39962 Distinct signal transduction pathways downstream of the (P)RR revealed by microarray and ChIP-chip analyses [Expt: Geni_Bafi]
GSE39965 Distinct signal transduction pathways downstream of the (P)RR revealed by microarray and ChIP-chip analyses
GSE40712 Expression data from CD34+ hematopoietic cells transduced with control or anti-HCLS1 shRNA
GSE44136 Expression data from primary CB erythroblasts, immortalized/induced erythroblasts, Fetal liver CD34+ blood stem cells, adult CD34+ blood stem cells, erythroleukemia cell line (TF-1) and human ESC and iPSCs
GSE44727 A Robust Method To Derive Functional Neural Crest Cells From Human Pluripotent Stem Cells
GSE46197 Expression data from miR-132 overexpressing immortalized human mammary fibroblasts and from mammary epithelial columnar cell hyperplasia cells co-cultured with miR-132 overexpressing fibroblasts
GSE46199 Columnar cell hyperplasia
GSE48540 CD146 expression in mesenchymal stem cells is associated with vascular smooth muscle commitment
GSE49124 Expression data from JQ1 (0.2 uM) treated tamoxifen-resistant MCF7 cells
GSE51111 Potential biomarkers tah could help to determine the prognosis of azoospermia treatment
GSE51629 Treatment of prostate cancer cell lines DU-145 and LNCaP with zebularine
GSE51834 Indoxyl sulfate, a uremic toxin and aryl-hydrocarbon receptor ligand, mediates progressive glomerular disease by damaging podocytes
GSE55867 Matrix Elasticity Does Not Affect Replicative Senescence or DNA Methylation Patterns of Mesenchymal Stem Cells [gene expression profiling]
GSE55889 Matrix Elasticity Does Not Affect Replicative Senescence or DNA Methylation Patterns of Mesenchymal Stem Cells
GSE56183 Integrated miRNA-mRNA analysis revealing the potential roles of miRNAs in chordomas
GSE56532 NORMALvs late stage OSCC
GSE56597 Wide methylation analysis in vestibular schwannoma [Affymetrix exon level analysis]
GSE56598 Wide methylation analysis in vestibular schwannoma
GSE60674 Upregulation of Interferon-inducible and damage response pathways in chronic graft-versus-host disease
GSE61000 Effects of differences in donors and passage numbers of endothelial progenitor cell (EPC)-derived vascular endothelial cells (VECs) on the phenotype determination of VECs (type-I versus type-II).
GSE61912 Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (array)
GSE62246 Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma
GSE63382 Comparasion between MCF7-NIK overexpressing cells, MCF7-control cells and MCF7-NIK depleted cells
GSE64001 Gene expression profiling of Human ES cell line (hESC) derived embryoid body (EB) treated with H3R17methylation inhibitor TBBD
GSE64274 Gene and miRNA expression profiling of Human ES cell line (hESC) derived embryoid body (EB) treated with H3R17methylation inhibitor TBBD
GSE64957 Microarray study of human adrenal zona glomerulosa (ZG), zona fasciculata (ZF) and aldosterone-producing adenomas (APA)
GSE66628 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology (Affymetrix_Gene1.0) (exon analysis)
GSE66649 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology
GSE70867 BAL cell gene expression is predictive of Mortality in Idiopathic Pulmonary Fibrosis and enriched for Genes of Airway Basal Cells
GSE73394 BAL cell gene expression is predictive of Mortality in Idiopathic Pulmonary Fibrosis and enriched for Genes of Airway Basal Cells (III)
GSE76575 The role of mRNA decay in p53-induced gene expression
GSE83353 Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle.
GSE84196 mRNA profiling in gastric cancer cell line AGS upon miR-25-3p silencing
GSE88852 Recipient and donor expression differences in children treated with HSCT
GSE89410 High-Throughput Screening of Tyrosine Kinase Inhibitor Cardiotoxicity using Human Induced Pluripotent Stem Cells
GSE89411 Tyrosine Kinase Inhibitor Cardiotoxicity
GSE90597 Molecular heterogeneity of NK/T-cell lymphoma (expression)
GSE90784 Molecular heterogeneity of NK/T-cell lymphoma
GSE125898 Gene expression profile of endothelial cell cultures exposed to uremic serum from Chronic Kidney Disease patients: role of MAPK signaling pathway
GSE127170 Transcriptomic Profiling of Trophoblast Fusion Using BeWo and JEG-3 Cell Lines
Data table header descriptions ID probe set ID
GB_LIST GenBank and RefSeq Accessions from mrna_assignment column
SPOT_ID genomic location of the corresponding transcript cluster in the version of the genome assembly used at annotation time. Coordinates are standard 1-based (length=stop-start+1).
seqname chromosome number
RANGE_GB NCBI RefSeq for chromosome of current build
RANGE_STRAND strand (+|-)
RANGE_START start (integer). Coordinates are standard 1-based (length=stop-start+1).
RANGE_STOP stop (integer). Coordinates are standard 1-based (length=stop-start+1).
probe_count Total number of probes in the probe set.
transcript_cluster_id Unique identifier for the transcript cluster containing the probe set.
exon_id Unique identifier for the exon cluster containing the probe set.
psr_id Unique identifier for the probe selection region containing the probe set.
gene_assignment Gene name(s) for each assigned mRNA for mRNAs that corresponds to known genes.
mrna_assignment Public mRNAs that should be detected by this probe set based on sequence alignment determined at the time of the current NetAffx annotation update.
probeset_type Array design category of the probe set.
Data table ID GB_LIST SPOT_ID seqname RANGE_GB RANGE_STRAND RANGE_START RANGE_STOP probe_count transcript_cluster_id exon_id psr_id gene_assignment mrna_assignment probeset_type 7892501 control
4
--- // pos_control // --- // --- // --- // ---
normgene->exon
7892502 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892503 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892504 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892505 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892506 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892507 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892508 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892509 control
4
--- // pos_control // --- // --- // --- // ---
normgene->exon
7892510 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892511 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892512 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892513 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892514 control
4
--- // pos_control // --- // --- // --- // ---
normgene->exon
7892515 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892516 control
4
--- // pos_control // --- // --- // --- // ---
normgene->exon
7892517 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892518 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892519 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
7892520 control
4
--- // neg_control // --- // --- // --- // ---
normgene->intron
257430 164168 Kbytes .Supplementary data files not provided
Less...
More...