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GEO help: Mouse over screen elements for information. |
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Status |
Public on Jul 12, 2010 |
Title |
Illumina Genome Analyzer IIx (Rattus norvegicus) |
Technology type |
high-throughput sequencing |
Distribution |
virtual |
Organism |
Rattus norvegicus |
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Submission date |
Jul 12, 2010 |
Last update date |
Aug 21, 2013 |
Contact name |
GEO |
Country |
USA |
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Samples (480)
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GSM614808, GSM614809, GSM661515, GSM661516, GSM747486, GSM747487
GSM783853, GSM783854, GSM862397, GSM862398, GSM862399, GSM862400, GSM862401, GSM862402, GSM862403, GSM862404, GSM873208, GSM873209, GSM873210, GSM873211, GSM1010935, GSM1010936, GSM1010937, GSM1020670, GSM1035405, GSM1039505, GSM1039506, GSM1039507, GSM1039508, GSM1039509, GSM1039510, GSM1039511, GSM1039512, GSM1039513, GSM1055025, GSM1055026, GSM1055027, GSM1055075, GSM1055076, GSM1055077, GSM1055120, GSM1055121, GSM1055122, GSM1207184, GSM1207185, GSM1207186, GSM1207187, GSM1207188, GSM1207189, GSM1207190, GSM1207191, GSM1207192, GSM1207193, GSM1207194, GSM1213638, GSM1213639, GSM1213640, GSM1213641, GSM1213642, GSM1213643, GSM1213644, GSM1213645, GSM1213646, GSM1213647, GSM1213648, GSM1213649, GSM1213650, GSM1213651, GSM1213660, GSM1213661, GSM1213662, GSM1213663, GSM1213664, GSM1213665, GSM1213666, GSM1213667, GSM1213668, GSM1300229, GSM1300230, GSM1300231, GSM1300232, GSM1300233, GSM1300234, GSM1300235, GSM1300236, GSM1300237, GSM1300238, GSM1300239, GSM1300240, GSM1300241, GSM1300242, GSM1300243, GSM1300244, GSM1300245, GSM1300246, GSM1314625, GSM1314626, GSM1314627, GSM1314628, GSM1314629, GSM1314630, GSM1314631, GSM1314632, GSM1314633, GSM1314634, GSM1314635, GSM1314636, GSM1314637, GSM1314638, GSM1314639, GSM1314640, GSM1314641, GSM1314642, GSM1314643, GSM1314644, GSM1314645, GSM1314646, GSM1314647, GSM1314648, GSM1531473, GSM1531474, GSM1531475, GSM1531476, GSM1531477, GSM1577133, GSM1577134, GSM1577135, GSM1577137, GSM1577140, GSM1642481, GSM1642482, GSM1642483, GSM1642484, GSM1709488, GSM1709489, GSM1709490, GSM1709491, GSM1709492, GSM1709493, GSM1709494, GSM1709495, GSM1709496, GSM1709497, GSM1709498, GSM1709499, GSM1943603, GSM1943604, GSM1943605, GSM1943606, GSM1943607, GSM1943608, GSM1943609, GSM1943610, GSM1943611, GSM1943612, GSM1943613, GSM1943614, GSM1943615, GSM1943616, GSM1943617, GSM1943618, GSM1943619, GSM1943620, GSM1943621, GSM1943622, GSM1954448, GSM1954449, GSM1954450, GSM1954451, GSM1954452, GSM1954453, GSM1954454, GSM1954455, GSM1954456, GSM1954457, GSM1954464, GSM1954465, GSM1954466, GSM1954467, GSM1954468, GSM1954469, GSM1954470, GSM1954471, GSM1954472, GSM1954473, GSM2083696, GSM2083697, GSM2083698, GSM2083699, GSM2083700, GSM2083701, GSM2083702, GSM2083703, GSM2083704, GSM2083705, GSM2083706, GSM2083707, GSM2083708, GSM2083709, GSM2083710, GSM2083711, GSM2083712, GSM2083713, GSM2083714, GSM2083715, GSM2083716, GSM2083717, GSM2083718, GSM2083719, GSM2083720, GSM2083721, GSM2083722, GSM2083723, GSM2083724, GSM2083725, GSM2083726, GSM2083727, GSM2083728, GSM2083729, GSM2083730, GSM2083731, GSM2083732, GSM2083733, GSM2083734, GSM2083735, GSM2083736, GSM2083737, GSM2083738, GSM2083739, GSM2083740, GSM2083741, GSM2083742, GSM2083743, GSM2083744, GSM2083745, GSM2083746, GSM2083747, GSM2083748, GSM2083749, GSM2101673, GSM2101674, GSM2101675, GSM2101676, GSM2101677, GSM2101678, GSM2101679, GSM2101680, GSM2101681, GSM2101682, GSM2101683, GSM2101684, GSM2101685, GSM2101686, GSM2101687, GSM2101688, GSM2101689, GSM2101690, GSM2101691, GSM2101692, GSM2114157, GSM2114158, GSM2114159, GSM2114160, GSM2114161, GSM2114162, GSM2114163, GSM2114164, GSM2114165, GSM2114166, GSM2114177, GSM2114178, GSM2114179, GSM2114180, GSM2114181, GSM2114182, GSM2114183, GSM2114184, GSM2114185, GSM2114186, GSM2127622, GSM2127623, GSM2254349, GSM2254350, GSM2254351, GSM2254352, GSM2466766, GSM2466767, GSM2466768, GSM2466769, GSM2466770, GSM2466771, GSM2466772, GSM2466773, GSM2752505, GSM2752506, GSM2881362, GSM2881363, GSM2881364, GSM2881365, GSM2881366, GSM2881367, GSM2881368, GSM2881369, GSM2881370, GSM2881371, GSM2881382, GSM2881383, GSM2881384, GSM2881385, GSM2881386, GSM2881387, GSM2881388, GSM2881389, GSM2881390, GSM2881391, GSM3452895, GSM3589856, GSM3589857, GSM3589858, GSM3589859, GSM3589860, GSM3589861, GSM3589862, GSM3589863, GSM3589864, GSM3589865, GSM3589866, GSM3589867, GSM3589868, GSM3589869, GSM3589870, GSM3589871, GSM3589872, GSM3589873, GSM3589874, GSM3589875, GSM3589876, GSM3589877, GSM3589878, GSM3589879, GSM3589880, GSM3589881, GSM3589882, GSM3589883, GSM3589884, GSM3589885, GSM3589886, GSM3589887, GSM3589888, GSM3589889, GSM3589890, GSM3589891, GSM3589892, GSM3589893, GSM3589894, GSM3589895, GSM3589896, GSM3589897, GSM3589898, GSM3589899, GSM3589900, GSM3916507, GSM3916508, GSM3916509, GSM3916510, GSM3916511, GSM3916512, GSM4426231, GSM4426232, GSM4426233, GSM4426234, GSM5259605, GSM5259606, GSM5259607, GSM5259608, GSM5259609, GSM5259610, GSM5416473, GSM5416474, GSM5416475, GSM5416476, GSM5416477, GSM5416478, GSM5416479, GSM5416480, GSM5416481, GSM5416482, GSM5416483, GSM5416484, GSM5416485, GSM5416486, GSM5416487, GSM5416488, GSM5416489, GSM5416490, GSM5416491, GSM5416492, GSM8493662, GSM8493663, GSM8493664, GSM8493665, GSM8493666, GSM8493667, GSM8493668, GSM8493669, GSM8493670, GSM8493671, GSM8493672, GSM8493673, GSM8493674, GSM8493675, GSM8493676, GSM8493677, GSM8493678, GSM8493679, GSM8493680, GSM8493681, GSM8493682, GSM8493683, GSM8493684, GSM8493685, GSM8493686, GSM8493687, GSM8493688, GSM8493689, GSM8493690, GSM8493691, GSM8493692, GSM8493693, GSM8493694, GSM8493695, GSM8493696, GSM8493697, GSM8493698, GSM8493699, GSM8493700, GSM8493701, GSM8493702, GSM8497478, GSM8497479, GSM8497480, GSM8497481, GSM8497482, GSM8497483, GSM8497484, GSM8497485, GSM8497486, GSM8497487, GSM8497488, GSM8497489, GSM8497490, GSM8497491, GSM8497492, GSM8497493, GSM8497494, GSM8497495, GSM8497496, GSM8497497, GSM8497498, GSM8497499, GSM8497500, GSM8497501, GSM8497502, GSM8497503, GSM8497504, GSM8497505, GSM8497506, GSM8497507, GSM8497508, GSM8497509, GSM8497510, GSM8497511, GSM8497512, GSM8497513, GSM8497514, GSM8497515, GSM8497516, GSM8497517, GSM8497518, GSM8497519
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Series (46)
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GSE25032 |
Identification of Neuronal RNA Targets of TDP-43-Containing Ribonucleoprotein Complexes |
GSE26871 |
Genome wide profiling of PAX8 binding stes in PCCL3 rat cells |
GSE26938 |
Global analysis of in vivo Pax8-binding sites in rat thyroid cells using high-throughput technologies: Chip-Seq and whole genome expression arrays |
GSE30198 |
Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq |
GSE31571 |
High resolution methylome map of rat reveals role of intragenic DNA methylation in identifying coding region and alternative splice site. |
GSE35132 |
Genome-wide analysis of EGR2/SOX10 binding in myelinating peripheral nerve |
GSE35664 |
High-throughput sequencing of endogenous small RNAs from rat vascular smooth muscle cells with and without Angiotensin II stimulation |
GSE41217 |
Acute Stress Induced Increase in Histone H3 Lys 9 Trimetylation in Rat Hippocampus |
GSE41637 |
Evolutionary dynamics of gene and isoform regulation in mammalian tissues |
GSE42207 |
Rodent trophoblast epigenome |
GSE42411 |
Whole-transcriptome analysis identifies re-expression of fetal splice variants in cardiac hypertrophy |
GSE43013 |
Gene Expression Defines Natural Changes in Mammalian Lifespan |
GSE49797 |
Maternal overnutrition causes insulin resistance and alters skeletal muscle oxidative phosphorylation in adult rat offspring |
GSE50077 |
Deep sequencing reveals increased DNA methylation in chronic rat epilepsy (MBD-seq) |
GSE50079 |
Deep sequencing reveals increased DNA methylation in chronic rat epilepsy (mRNA-seq) |
GSE50080 |
Deep sequencing reveals increased DNA methylation in chronic rat epilepsy |
GSE53762 |
Whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths (RNA-Seq) |
GSE53861 |
Whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat, at different sequencing depths |
GSE54413 |
Genome-wide Transcriptional Profiling of Skin and Dorsal Root Ganglia after Ultraviolet-B-Induced Inflammation |
GSE62688 |
Transcriptome profiling based study of early gene responses in susceptible and tolerant rat lung tissues during acute hypobaric hypoxia |
GSE64703 |
Sox10 Binding Analysis in the Central and Peripheral Nervous System |
GSE67203 |
Long-term consequences of chronic fluoxetine exposure on the expression of myelination-related genes in the rat hippocampus |
GSE69819 |
Transcriptomic analysis of the estrogenic effect of soy protein isolate in rat uterus |
GSE75119 |
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (TBI – MBD-seq) |
GSE75120 |
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (TBI – mRNA-seq) |
GSE75121 |
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy |
GSE75400 |
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (Amygdala stimulation – MBD-seq) |
GSE75402 |
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (Amygdala stimulation – mRNA-seq) |
GSE75403 |
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy |
GSE79017 |
MicroRNA-SEQ analysis of kidney and liver damage in rat |
GSE79727 |
microRNA profiling in normal and hyperplastic human and murine parathyroid glands |
GSE80174 |
Analysis of Post-TBI Gene Expression Signature Reveals Tubulins, NFE2L2, NFkB, CD44, and S100A4 as Treatment Targets for Traumatic Brain Injury |
GSE80453 |
Reciprocal regulation of cardiac chromatin by the chromatin structural proteins HMGB and CTCF |
GSE84932 |
RNA-Seq of tissues from Rat eye and retina samples |
GSE94008 |
Genome-wide identification of glucocorticoid receptor binding sites in the whole hippocampus of adrenalectomised male rats given corticosterone infusion and stressed or non-stressed. |
GSE103011 |
Identification of genes expressed in a mesenchymal subset regulating prostate organogenesis using tissue and single cell transcriptomics |
GSE107837 |
Transcriptomics but not DNA methylomics find Tp73, Cebpd, Pax6 and Spi1 transcription factors as treatment targets for traumatic brain injury |
GSE122006 |
Profiling of 18 - 45 nt small RNAs in the cauda epididymal sperm of mice and rats. |
GSE126057 |
Deletion of the KH1 domain coding sequence of Fmr1 leads to transcriptional alterations and attentional deficits in rats |
GSE133696 |
Digitoxin Inhibits Epithelial-to-Mesenchymal-Transition in Hereditary Castration Resistant Prostate Cancer |
GSE147335 |
Gene expression profile of metabolic dysfunction in the aorta of male Sprague-Dawley rats following a short-term high fat diet |
GSE173085 |
Identification of significantly differential expression of long noncoding RNAs and pathways in hepatic fibrosis rat liver issues |
GSE179379 |
Chronic LSD alters gene expression profiles in the mPFC relevant to schizophrenia [RNA-seq] |
GSE179380 |
LSD influences gene expression patterns within the mammalian brain |
GSE276226 |
Prenatal Maternal Stress in Rats Alters the Epigenetic and Transcriptomic Landscape of the Maternal-Fetal Interface Across Four Generations [miRNA] |
GSE276382 |
Prenatal Maternal Stress in Rats Alters the Epigenetic and Transcriptomic Landscape of the Maternal-Fetal Interface Across Four Generations [methylation] |
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Supplementary data files not provided |
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