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Platform GPL10335 Query DataSets for GPL10335
Status Public on Apr 17, 2010
Title Affymetrix Human Genome U133 Plus 2.0 Array [CDF from AffyProbeMiner]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see the Affymetrix website
 
Description This identical to GPL570 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
 
Submission date Apr 16, 2010
Last update date Jan 18, 2013
Contact name conny mathay
E-mail(s) conny.mathay@fundp.ac.be
Organization name FUNDP
Street address 61, rue de Bruxelles
City Namur
ZIP/Postal code 5000
Country Belgium
 
Samples (35) GSM533856, GSM533857, GSM533858, GSM533859, GSM533860, GSM533861 
Series (2)
GSE21364 mRNA expression data from keratinocytes with disorganized lipid raft structures (by cholesterol depletion by methyl-beta-cyclodextrin)
GSE35411 Differential gene expression in adipose tissue from obese human subjects during weight loss and weight maintenance
Relations
Alternative to GPL570 (Alternative CDF [official])

Data table header descriptions
ID
Gene name
GB_LIST
GeneID
Affymetrix Probe Set ID List

Data table
ID Gene name GB_LIST GeneID Affymetrix Probe Set ID List
HG-U133_Plus_2HF1 ZNF605 AL832191.1 NM_183238.1 AL832623.2 90462 227822_at
HG-U133_Plus_2HF10 C2orf37 NM_025000.2 80067 220172_at 231921_at
HG-U133_Plus_2HF100 CSN3 BC010935.1 M73628.1 NM_005212.1 1448 207803_s_at
HG-U133_Plus_2HF10000 GPR115 AY140957.1 NM_153838.3 221393 1553031_at
HG-U133_Plus_2HF10002 FBXO8 AF115514.1 BC040456.1 NM_012180.2 26269 1554806_a_at 223240_at
HG-U133_Plus_2HF10003 ARL3 NM_004311.2 403 1568590_at 202641_at 213433_at
HG-U133_Plus_2HF10004 PSPC1 NM_001042414.1 55269 226574_at
HG-U133_Plus_2HF10005 CPOX D16611.1 NM_000097.4 1371 204172_at
HG-U133_Plus_2HF10006 MCPH1 BC030702.1 79648 1554155_at
HG-U133_Plus_2HF10007 GADD45B AF090950.1 NM_015675.2 4616 207574_s_at 209304_x_at 209305_s_at 213560_at
HG-U133_Plus_2HF10008 FMO1 BC047129.1 M64082.1 NM_002021.1 2326 205666_at
HG-U133_Plus_2HF10009 C22orf16 BC065232.1 NM_213720.1 400916 224932_at
HG-U133_Plus_2HF1001 STEAP4 AF423423.1 BC020600.1 NM_024636.2 79689 220187_at
HG-U133_Plus_2HF10010 TBK1 BC034950.2 NM_013254.2 29110 218520_at
HG-U133_Plus_2HF10012 ZAN AF332975.1 AF332976.1 AF332977.1 NM_003386.1 AF332978.1 AF332979.1 7455 224263_x_at 224264_x_at 224267_x_at 224268_x_at
HG-U133_Plus_2HF10014 NUB1 AF459743.1 NM_016118.3 51667 222512_at 234332_at
HG-U133_Plus_2HF10015 NEK2 BC043502.1 NM_002497.2 U11050.1 4751 204641_at
HG-U133_Plus_2HF10016 ASL BC033146.1 M14218.1 NM_000048.3 NM_001024943.1 NM_001024944.1 NM_001024946.1 435 204608_at
HG-U133_Plus_2HF10017 VIPR2 NM_003382.3 7434 205946_at
HG-U133_Plus_2HF10019 C13orf27 BC015148.2 NM_138779.2 93081 213346_at

Total number of rows: 23798

Table truncated, full table size 1854 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL10335_HG-U133_Plus_2_transcript_ccds.cdf.gz 9.2 Mb (ftp)(http) CDF
GPL10335_HG-U133_Plus_2_transcript_ccds.gin.gz 521.7 Kb (ftp)(http) GIN
GPL10335_HG-U133_Plus_2_transcript_ccds.psi.gz 139.5 Kb (ftp)(http) PSI

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