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1652 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by genome tiling array
GSE23756	Pervasive gene content variation and copy number variation in both maize and its undomesticated progenitor	Genome variation profiling by genome tiling array	Zea mays subsp. parviglumis Zea mays	58	PAIR	Steve R Eichten	Oct 15, 2010
GSE16938	Maize Comparative Genomic Hybridization (CGH) between B73, Mo17, M0022 (RIL), and M0023 (RIL)	Genome variation profiling by genome tiling array	Zea mays	9	PAIR TXT	Patrick S. Schnable	Nov 20, 2009
GSE117914	Copy Number Variation across 12 tribes of African cichlid species	Genome variation profiling by genome tiling array	Xenotilapia spiloptera Variabilichromis moorii Tropheus moorii Tropheops sp. 'red cheek' Stomatepia mariae Sarotherodon melanotheron Sarotherodon lamprechti Sarotherodon knauerae Sarotherodon galilaeus Rubricatochromis bimaculatus Rhamphochromis longiceps Pungu maclareni Pundamilia nyererei Pseudocrenilabrus multicolor victoriae Paralabidochromis sp. Pallidochromis tokolosh Oreochromis niloticus Oreochromis ndalalani Oreochromis latilabris Oreochromis grahami Oreochromis alcalicus Ophthalmotilapia ventralis Nyassachromis microcephalus Neolamprologus brichardi Neochromis omnicaeruleus Maylandia zebra Lobochilotes labiata Lepidiolamprologus elongatus Labeotropheus fuelleborni Konia eisentrauti Julidochromis ornatus Hemichromis fasciatus Haplochromis thereuterion Haplochromis chilotes Haplochromis burtoni Eretmodus cyanostictus Diplotaxodon greenwoodi Cyprichromis leptosoma Cyphotilapia frontosa Cyathopharynx furcifer Coptodon zillii Coptodon kottae Coptodon fusiforme Coptodon ejagham Coptodon deckerti Copadichromis virginalis Copadichromis borleyi Callochromis macrops Boulengerochromis microlepis Benthodesmus elongatus Astatotilapia flaviijosephi Astatotilapia calliptera Astatotilapia bloyeti Astatoreochromis alluaudi	168	PAIR TXT	Suzy CP Renn	Jul 26, 2019
GSE23576	Widespread, focal copy number variations (CNV) in Trypanosoma cruzi strains	Genome variation profiling by genome tiling array	Trypanosoma cruzi	16	PAIR	Todd A Minning	Aug 06, 2011
GSE57461	High-density deletion bin map of wheat chromosome 7B	Genome variation profiling by genome tiling array	Triticum turgidum subsp. durum Triticum aestivum	22	PAIR	Tatiana Belova	May 09, 2014
GSE71190	High-density deletion bin map of wheat D genome	Genome variation profiling by genome tiling array	Triticum aestivum Aegilops tauschii	96	PAIR	Yi Wang	Jul 22, 2015
GSE19606	ArrayCGH of Trichoderma reesei strains QM9123, QM9414, NG14 and RutC-30	Genome variation profiling by genome tiling array	Trichoderma reesei	14	PAIR	Marika Vitikainen	Nov 26, 2010
GSE58334	Epigenetics and the Evolution of Darwin’s Finches	Methylation profiling by genome tiling array Genome variation profiling by genome tiling array	Taeniopygia guttata Platyspiza crassirostris Geospiza scandens Geospiza fuliginosa Geospiza fortis Camarhynchus parvulus	24	CSV GFF PAIR TXT	Michael K Skinner	Jun 10, 2014
GSE10753	A Snapshot of Copy Number Variation in the pig genome	Genome variation profiling by genome tiling array	Sus scrofa	24	PAIR	Jakob Hedegaard	Mar 19, 2009
GSE19047	Copy number variation in the porcine genome	Genome variation profiling by genome tiling array	Sus scrofa	48	GFF PAIR TXT	Jakob Hedegaard	May 01, 2010
GSE40244	Regions of XY homology in the pig X chromosome and the boundary of the pseudoautosomal region	Genome variation profiling by genome tiling array	Sus scrofa	4	TXT	Ben Skinner	Aug 30, 2012
GSE41488	Identification of global copy number variations among diverse pig breeds by a CGH array	Genome variation profiling by genome tiling array	Sus scrofa	12	PAIR	Fenge Li	Aug 09, 2013
GSE46847	CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds	Genome variation profiling by genome tiling array	Sus scrofa	12	PAIR	Huimin Kang	May 15, 2013
GSE49299	CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds [Agilent]	Genome variation profiling by genome tiling array	Sus scrofa	12	TXT	Huimin Kang	Jun 29, 2015
GSE144064	Genome-wide epistatic interaction networks affecting feed efficiency in Duroc and Landrace pigs	Genome variation profiling by genome tiling array	Sus scrofa	109	TAB TXT	Haja N Kadarmideen	Mar 23, 2020
GSE26052	Mutation Mapping of 31 Streptococcus suis strains	Genome variation profiling by genome tiling array	Streptococcus suis GZ1 Streptococcus suis	31	PAIR	Xiao Zheng	Aug 09, 2012
GSE17868	Mutation Mapping of Streptococcus suis serotype 2 strains	Genome variation profiling by genome tiling array	Streptococcus suis	36	PAIR TXT	Zuo-Wei Wu	Aug 29, 2009
GSE40035	Mutation Mapping of 40 Streptococcus suis strains	Genome variation profiling by genome tiling array	Streptococcus suis	80	PAIR TXT	Xiao Zheng	May 20, 2014
GSE51148	A novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads (Staphylococcus aureus)	Genome variation profiling by genome tiling array	Staphylococcus aureus	33	FTR	Martijs Jonker	May 19, 2014
GSE52122	A novel aCGH method for non-model organisms for assessing genomes and de-novo transcriptome sequencing reads	Genome variation profiling by genome tiling array Genome variation profiling by array	Staphylococcus aureus Danio rerio	45	FTR	Martijs Jonker	May 19, 2014