GEO Browser - GEO

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19 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Sus scrofa		GTF
GSE43013	Gene Expression Defines Natural Changes in Mammalian Lifespan	Expression profiling by high throughput sequencing	Acomys cahirinus Bos taurus Canis lupus familiaris Capra hircus Cavia porcellus Chlorocebus aethiops Equus caballus Erinaceus europaeus Felis catus Meles meles Meriones unguiculatus Mesocricetus auratus Murina leucogaster Mus musculus Oryctolagus cuniculus Peromyscus leucopus Petaurus breviceps Rattus norvegicus Suncus murinus Sus scrofa Tadarida brasiliensis Tamias sibiricus Ursus americanus	141	GTF TXT SRA Run Selector	Alexey Fushan	Feb 17, 2015
GSE160028	Long-read RNA sequencing of cattle, pig, and chicken tissues	Expression profiling by high throughput sequencing	Bos taurus Gallus gallus Sus scrofa	190	GTF TXT SRA Run Selector	Michelle M Halstead	Jan 01, 2021
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE43667	Deep Sequencing of the Porcine Endometrial Transcriptome on Day 14 of Pregnancy	Expression profiling by high throughput sequencing	Sus scrofa	8	GTF TXT SRA Run Selector	Stefan Michael Bauersachs	Mar 07, 2013
GSE48862	Deep sequencing of the porcine endometrial transcriptome on day 12 of pregnancy	Expression profiling by high throughput sequencing	Sus scrofa	8	GTF TXT SRA Run Selector	Stefan Michael Bauersachs	Oct 31, 2013
GSE112527	Gene expression profiling of porcine skeletal muscle satellite cells after challenge with poly I:C	Expression profiling by high throughput sequencing	Sus scrofa	21	GTF SRA Run Selector	Thuy Nhien Tran Thi	Mar 31, 2018
GSE116951	Identification of candidate genes and regulatory factors underlying intramuscular fat content through longissimus dorsi transcriptome analyses in heavy Iberian pigs	Expression profiling by high throughput sequencing	Sus scrofa	12	GTF SRA Run Selector	María Muñoz Muñoz	Jul 12, 2018
GSE132735	Transcriptome analysis of a PRRSV-infected and control PAMs	Expression profiling by high throughput sequencing	Sus scrofa	6	GTF SRA Run Selector	Junjing Wu	Jun 20, 2019
GSE134133	Long Non-Coding RNA and mRNA profiling using High-throughput RNA sequencing in pseudorabies virus type II infected cells	Expression profiling by high throughput sequencing Other	Sus scrofa	9	FA GTF TXT SRA Run Selector	Kailun Zhang	Jul 11, 2022
GSE136705	Expression profiles of long noncoding RNAs and mRNAs in ST cells infected by PDCoV	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa	6	FA GTF TXT SRA Run Selector	junli liu	Aug 28, 2022
GSE146408	Transcriptome profiling of porcine jejunum tissue, its derived organoids over long-term culture, and transformed cell line IPECJ2 as reference model	Expression profiling by high throughput sequencing	Sus scrofa	17	CXB GTF XLSX SRA Run Selector	Bart van der Hee	Mar 13, 2020
GSE155915	Differences in loin tenderness of Iberian pigs explained through dissimilarities in their transcriptome expression profile	Expression profiling by high throughput sequencing	Sus scrofa	12	GTF SRA Run Selector	María Muñoz Muñoz	Oct 26, 2020
GSE162145	A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription [RNA-Seq pig]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa	194	GTF TXT SRA Run Selector	jin long	Apr 20, 2021
GSE163513	Consequences of a low protein diet in the liver and longissimus dorsi transcriptome of Duroc x Iberian crossbred pigs	Expression profiling by high throughput sequencing	Sus scrofa	40	GTF SRA Run Selector	María Muñoz Muñoz	Jul 01, 2021
GSE180939	Expression profiles of long noncoding RNAs and mRNAs in primary porcine macrophages (PAMs) Infected with African swine fever virus	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa	6	FA GTF XLS SRA Run Selector	Hu boli	Jul 27, 2024
GSE185849	Single-cell RNA sequencing of airway submucosal glands in wild-type and cystic fibrosis Pigs	Expression profiling by high throughput sequencing	Sus scrofa	8	GTF H5 RDS SRA Run Selector	Michael J. Welsh	Nov 16, 2021
GSE210556	Longitudinal RNA-seq of Gene-edited Porcine Kidneys in Cynomolgus Macaques	Expression profiling by high throughput sequencing	Sus scrofa	29	FA GTF RDS TAR	Robert Policastro	Apr 21, 2023
GSE216029	Clinical and molecular correlation defines activity of physiological pathways in life-sustaining kidney xenotransplantation [RNA-Seq]	Expression profiling by high throughput sequencing	Sus scrofa	9	FA GTF RDS TAR	Robert Policastro	Apr 25, 2023
GSE230506	Long- and short-read RNA sequencing from five reproductive organs of boar.	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa	70	FA GTF TXT	Huo Jinlong	Aug 24, 2023