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11 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens			TXT	Christopher Benner
GSE47626	Differential LINE-1 retrotransposition in induced pluripotent stem cells between humans and great apes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Pan paniscus Pan troglodytes	18		TXT SRA Run Selector	Christopher Benner	Oct 23, 2013
GSE54968	Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	6		TXT SRA Run Selector	Christopher Benner	May 15, 2015
GSE60603	An alternative pluripotent state confers interspecies chimaeric competency [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	14		TXT SRA Run Selector	Christopher Benner	May 06, 2015
GSE68645	The DAXX co-repressor is directly recruited to active regulatory elements genome-wide to regulate autophagy programs in a model of human prostate cancer (RNA-seq)	Expression profiling by high throughput sequencing	Homo sapiens	4		TXT SRA Run Selector	Christopher Benner	Jun 24, 2015
GSE69932	Comparison of the transcriptome and chromatin state between human cord blood HSC and human iPSC derived hematopoietic progenitor using next-generation sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9		BED TXT SRA Run Selector	Christopher Benner	Jan 01, 2019
GSE77129	Wiskott-Aldrich Syndrome-causative mutations disrupt alternative splicing and promote gene networks predisposed to hematologic malignancies	Expression profiling by high throughput sequencing	Homo sapiens	5		TXT SRA Run Selector	Christopher Benner	Jan 01, 2019
GSE87831	Nucleoporin-mediated regulation of cell identity genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	33		BED TXT SRA Run Selector	Christopher Benner	Nov 15, 2016
GSE103477	Transcription elongation regulates genome 3D structure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	253		BED BEDGRAPH HIC TXT SRA Run Selector	Christopher Benner	Aug 23, 2018
GSE143780	Shear Stresses Associated with Cardiopulmonary Bypass Activate Expression Inflammatory Cytokines and Induce Necroptosis in Monocytes Via Calcium Dependent Signaling	Expression profiling by high throughput sequencing	Homo sapiens	35		TXT SRA Run Selector	Christopher Benner	Dec 06, 2020
GSE192365	Evolution of gene regulatory networks during human cardiogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53		TXT SRA Run Selector	Christopher Benner	Jul 15, 2022
GSE199431	Position-dependent function of human sequence-specific transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Chlorocebus sabaeus Homo sapiens Mus musculus	56		BED FA TSV TXT	Christopher Benner	Apr 26, 2024