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80 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		FA
GSE27823	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells [ChIP-Seq, Gro-Seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	30	BED BEDGRAPH FA SRA Run Selector	Christopher Benner	May 15, 2011
GSE27824	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	42	BED BEDGRAPH FA	Christopher Benner	May 15, 2011
GSE87257	Systematic mapping of functional enhancer-promoter connections with CRISPR interference	Expression profiling by high throughput sequencing	Homo sapiens	24	BED FA TXT SRA Run Selector	Jesse Engreitz	Nov 11, 2016
GSE106476	RG/RGG boxes are common binding motifs in RNA-G-quadruplex-interacting proteins	Expression profiling by high throughput sequencing	Homo sapiens	18	BED BEDGRAPH FA TXT SRA Run Selector	Giovanni Marsico	Apr 30, 2018
GSE120574	The immediate impact of exoribonucleolysis on nuclear RNA processing, turnover and transcriptional control revealed by rapid depletion of DIS3, EXOSC10 or XRN2 from human cells	Expression profiling by high throughput sequencing Other	Homo sapiens	12	BED BW FA SRA Run Selector	Steven West	Mar 06, 2019
GSE129261	Rip-seq of MTR4 in PLC/PRF5	Expression profiling by high throughput sequencing	Homo sapiens	2	BED FA SRA Run Selector	Kaiyuan Ji	Dec 19, 2019
GSE165181	Quantifying full-length circular RNAs in cancer	Expression profiling by high throughput sequencing	Homo sapiens	15	BED FA TSV SRA Run Selector	Hung On Ken Yu	Apr 06, 2021
GSE181416	The dynamic, combinatorial cis-regulatory lexicon of epidermal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Escherichia coli Homo sapiens	46	BED FA TXT	Daniel Sunwook Kim	Aug 04, 2021
GSE190955	Complex Genomic Patterns of Abasic Sites in Mammalian DNA Revealed by High-Resolution SSiNGLe-AP Method	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	271	BED FA TXT SRA Run Selector	Huifen Cao	Sep 15, 2022
GSE199431	Position-dependent function of human sequence-specific transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Chlorocebus sabaeus Homo sapiens Mus musculus	56	BED FA TSV TXT	Christopher Benner	Apr 26, 2024
GSE202900	Synonymous codon usage regulates translation initiation	Expression profiling by high throughput sequencing Other	Homo sapiens	12	BED BW FA TXT	Olivia Rissland	May 16, 2022
GSE142284	Genome-wide mapping of AP sites, binding of repair proteins and G4 structure formation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	28	BIGWIG BW FA TXT SRA Run Selector	Shrabasti Roychoudhury	Jun 02, 2020
GSE30992	An Alternative Splicing Switch Regulates Embryonic Stem Cell Pluripotency and Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by array	Homo sapiens synthetic construct	16	BOWTIE FA TXT	Xinchen Wang	Sep 15, 2011
GSE145678	FUS-CHOP and ISWI chromatin remodeling in human myxoid liposarcoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BW FA NARROWPEAK TXT SRA Run Selector	Ian Johnathan Davis	Feb 21, 2022
GSE176464	Regulation of alternative splicing by a novel BRR2 interactor C9ORF78	Expression profiling by high throughput sequencing	Homo sapiens	4	BW FA SRA Run Selector	IBRAHIM AVSAR ILIK	Feb 04, 2022
GSE185418	The intrinsically disordered TSSC4 protein acts as a helicase inhibitor, placeholder and multi-interaction coordinator during snRNP assembly and recycling	Expression profiling by high throughput sequencing Other	Homo sapiens	2	BW FA SRA Run Selector	IBRAHIM AVSAR ILIK	Jan 17, 2022
GSE211736	Joint epigenome profiling reveals cell-type-specific gene regulatory programs in human cortical organoids	Expression profiling by high throughput sequencing Other	Escherichia coli Homo sapiens Mus musculus	27	BW FA PICKLE TAB TSV TXT SRA Run Selector	Boyan Bonev	Aug 23, 2023
GSE234489	Herpesviruses mimic zygotic genome activation to promote viral replication	Expression profiling by high throughput sequencing Other	Homo sapiens	80	BW FA GTF TSV TXT	Emanuel Wyler	Jun 11, 2023
GSE67812	RNA sequencing of heart samples of myotonic dystrophic (DM1) patients	Expression profiling by high throughput sequencing	Homo sapiens	6	CSV FA TXT SRA Run Selector	nicolas charlet	Apr 14, 2015
GSE102187	Transcriptional Modulation of Human Endogenous Retroviruses in Primary CD4+ T Cells Following Vorinostat Treatment	Expression profiling by high throughput sequencing	Homo sapiens	8	CSV FA TXT SRA Run Selector	Cory Haley White	May 01, 2018