GEO Browser - GEO

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154 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BROADPEAK
GSE186201	A chemically-targetable transcription factor-chromatin remodeler interaction underlies SARS-CoV-2 susceptibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Chlorocebus sabaeus Homo sapiens	85	BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Cigall Kadoch	Oct 11, 2022
GSE123105	Selective roles of vertebrate PCF11 in premature and full-length transcript termination	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens	95	BED BEDGRAPH BROADPEAK BW	Kinga Kamieniarz-Gdula	Feb 25, 2019
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155	BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Danio rerio Homo sapiens Mus musculus	80	BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE65520	Dynamic regulation of the histone variant H1.0 contributes to intratumor epigenetic and functional heterogeneity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	BED BROADPEAK NARROWPEAK	Paola Scaffidi	May 01, 2016
GSE67382	BAF controls genome accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Douglas Porter	Nov 12, 2015
GSE76922	Comprehensive molecular phenotypic effects of the large deletion on chromosome 22q11.2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	59	BROADPEAK FPKM_TRACKING NARROWPEAK TXT SRA Run Selector	Xianglong Zhang	Sep 05, 2017
GSE80240	Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	21	BED BROADPEAK BW	Kexin Xu	Sep 01, 2017
GSE81826	Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	18	BROADPEAK TXT SRA Run Selector	Davide Cittaro	Aug 26, 2016
GSE85631	Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	105	BED BROADPEAK NARROWPEAK	Yen-Sin Ang	Dec 15, 2016
GSE89303	Global transcriptional analysis and genome-wide analysis of chromatin state in extended pluripotent stem cells, primed pluripotent stem cells, and naïve pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BROADPEAK	Hongkui Deng	Apr 06, 2017
GSE90634	SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	78	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Cigall Kadoch	Sep 25, 2017
GSE93997	Chromatin structure alteration regulates key transcription factor expression during blood cell differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	20	BED BROADPEAK TXT	Yanjian Li	Mar 07, 2018
GSE99680	Estrogen signaling is reprogrammed in breast tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	107	BROADPEAK CSV NARROWPEAK SRA Run Selector	Hari Singhal	May 27, 2019
GSE99986	Low and High Dose Progestins Elicit Distinct Breast Cancer Biology	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	47	BROADPEAK CSV SRA Run Selector	Hari Singhal	Jun 13, 2020
GSE104690	A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BIGWIG BROADPEAK CSV SRA Run Selector	Micah Gearhart	Jan 11, 2018
GSE104988	KDM5B links cellular transcriptome heterogeneity to therapy resistance	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	333	BED BROADPEAK BW NARROWPEAK TSV TXT	Kornelia Polyak	Oct 03, 2018
GSE108028	The SS18-SSX fusion oncoprotein hijacks BAF complex targeting and function to drive synovial sarcoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	124	BROADPEAK BW TXT	Cigall Kadoch	May 31, 2018
GSE108470	Lysine benzoylation is a novel histone mark	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BROADPEAK	He Huang	Jun 08, 2018
GSE110657	Binding of TMPRSS2-ERG to BAF Chromatin Remodeling Complexes Mediates Prostate Oncogenesis.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	50	BROADPEAK NARROWPEAK TXT	Cigall Kadoch	Aug 02, 2018