GEO Browser - GEO

Series

Samples

Platforms

DataSets

631 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Homo sapiens		BEDGRAPH
GSE85747	Initiation of mtDNA transcription is followed by pausing, and diverge across human cell types and during evolution	Expression profiling by high throughput sequencing Third-party reanalysis	Caenorhabditis elegans Drosophila melanogaster Homo sapiens Macaca mulatta Mus musculus Pan troglodytes Rattus norvegicus		BEDGRAPH XLS	Dan Mishmar	Sep 30, 2016
GSE167075	m6A modification in SARS-CoV-2 virus regulates host cell innate immune response	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Chlorocebus aethiops Homo sapiens Severe acute respiratory syndrome coronavirus 2	16	BEDGRAPH BW XLSX SRA Run Selector	Na Li	Apr 27, 2021
GSE196160	Human centromere repositioning activates transcription and opens chromatin fibre structure [RNAseq]	Expression profiling by high throughput sequencing	Cricetulus griseus Homo sapiens	4	BEDGRAPH	Catherine Naughton	Sep 07, 2022
GSE123105	Selective roles of vertebrate PCF11 in premature and full-length transcript termination	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens	95	BED BEDGRAPH BROADPEAK BW	Kinga Kamieniarz-Gdula	Feb 25, 2019
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155	BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE35842	RIP-seq analysis of eukaryotic Sm proteins identifies three major categories of Sm-containing ribonucleoproteins	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	28	BEDGRAPH RPKM TXT WIG SRA Run Selector	Zhipeng Lu	Dec 01, 2013
GSE47938	Multiple roles for LEC in initiation and elongation phases of snRNA gene transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	28	BED BEDGRAPH SRA Run Selector	Alexander (Garrett) Garruss	Aug 08, 2013
GSE78984	MNase titration reveals differences between nucleosome occupancy and chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	74	BEDGRAPH SRA Run Selector	Michael Tolstorukov	Apr 18, 2016
GSE166202	STL-seq reveals distinct pause release and termination kinetics for promoter-proximal paused RNA polymerase II transcripts	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	32	BEDGRAPH SRA Run Selector	Matthew Simon	Sep 13, 2021
GSE223557	Comparison of STAMP and TRIBE for identifying the targets of RNA-binding proteins in human and Drosophila cells	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens	24	BEDGRAPH	Katharine Abruzzi	Feb 03, 2023
GSE43520	The evolution of lncRNA repertoires and expression patterns in tetrapods	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Gallus gallus Gorilla gorilla Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Ornithorhynchus anatinus Xenopus tropicalis	55	BEDGRAPH TXT SRA Run Selector	Anamaria Necsulea	Jan 19, 2014
GSE108522	Disruption of the TFAP2A regulatory domain causes Branchio-Oculo-Facial Syndrome (BOFS) and illuminates pathomechanisms for other human neurocristopathies	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gallus gallus Homo sapiens	49	BEDGRAPH	Milos Nikolic	Nov 01, 2018
GSE120271	RNA-seq and ChIP-seq for human-specific regulation of neural maturation identified by cross-primate transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Gorilla Homo sapiens Macaca mulatta Pan paniscus Pan troglodytes	79	BED BEDGRAPH TXT SRA Run Selector	Fred H Gage	Sep 20, 2020
GSE225716	A nucleosome switch primes Hepatitis B Virus infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Hepatitis B virus Homo sapiens	101	BEDGRAPH BW TBI	Andres Mansisidor	Mar 03, 2023
GSE22666	Genome-wide characterization of long nonpolyadenylated RNAs	Expression profiling by high throughput sequencing	Homo sapiens	4	BEDGRAPH TXT SRA Run Selector	Ling-Ling Chen	Jul 01, 2012
GSE23109	Genome-wide analysis of RNAs associated with Lin28	Expression profiling by high throughput sequencing	Homo sapiens	2	BEDGRAPH SRA Run Selector	Ling-Ling Chen	Jan 18, 2011
GSE23316	ENCODE Caltech RNA-seq	Expression profiling by high throughput sequencing	Homo sapiens	36	BED12 BEDGRAPH BOWTIE FASTA PSL RPKM SRA Run Selector	ENCODE DCC	Jul 30, 2010
GSE24399	Genome-wide characterization of long nonpolyadenylated RNAs, experiment II	Expression profiling by high throughput sequencing	Homo sapiens	12	BEDGRAPH SRA Run Selector	Ling-Ling Chen	Jan 28, 2011
GSE27443	RNA-Seq of rRNA depleted circulating endothelial progenitor cells (cEPCs) in trisomy 21 and euploid samples	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	2	BED BEDGRAPH TXT	Valerio Costa	May 05, 2011
GSE27823	Reprogramming Transcriptional Responses through Functionally-Distinct Classes of Enhancers in Prostate Cancer Cells [ChIP-Seq, Gro-Seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	30	BED BEDGRAPH FA SRA Run Selector	Christopher Benner	May 15, 2011