GEO Browser - GEO

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106 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Homo sapiens		BW
GSE246223	A Mouse Model for Metabolic Dysfunction-associated Steatotic Liver Disease and Hepatocellular Carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	160	BED BW	Byung-Kwan Jeong	Jun 16, 2024
GSE133109	A first exon termination checkpoint that preferentially suppresses extragenic transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	82	BW	Viviana Piccolo	Feb 01, 2021
GSE185708	A hyper-quiescent chromatin state is a barrier to productive regeneration during aging.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	256	BW TXT	Supriyo De	Mar 17, 2023
GSE232490	A multiscale 3D chromatin architecture that controls development of the humoral immune system is assembled by IKAROS	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	120	BEDGRAPH BW HIC TBI	Katia Georgopoulos	Nov 20, 2023
GSE189235	A trivalent nucleosome interaction by PHIP/BRWD2 is disrupted in neurodevelopmental disorders and cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW	Marc Morgan	Nov 22, 2021
GSE222910	ATAC-seq, ChIP-seq and RNA-seq of in vitro differentiated naïve, Th1, and Th9 cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	110	BED BW	Daniella Schwartz	Apr 28, 2023
GSE240326	An in situ method for identification of transcriptome-wide protein-RNA interactions in cells	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	78	BED BW TSV	Brian Yee	Jun 13, 2024
GSE223263	Autonomous transposons tune their sequences to ensure somatic suppression.	Other Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	153	BW TXT	IBRAHIM AVSAR ILIK	Jan 08, 2024
GSE203322	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BIGWIG BW MTX RESULTS TSV TXT	Masaki Nomura	Oct 31, 2023
GSE236960	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BW TXT	Weijia Zang	Oct 31, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE213670	Cancer associated fibroblasts play an important role in prostate cancer progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BW	Hanling Wang	Jun 22, 2023
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	107	BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE200586	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	174	BW WIG	Luke Thomas Isbel	Apr 29, 2023
GSE247087	Co-repressor CDYL confers forebrain identity to human cortical organoids by negatively regulating NNAT	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BW	Xi-Yin Zhang	Nov 13, 2023
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE230319	DNA-guided transcription factor cooperativity shapes face and limb mesenchyme	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	379	BW CSV NARROWPEAK	Seungsoo Kim	May 30, 2023
GSE214692	Dissecting developmental disorders caused by CTCF mutation at R567	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	71	BW CSV HIC MTX NARROWPEAK TSV	gongcheng Hu	May 05, 2024
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023
GSE248753	EWSR1::ATF1 Orchestrates the Clear Cell Sarcoma Transcriptome in Human Tumors and A Mouse Genetic Model	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BW	Li Li	Dec 01, 2023