GEO Browser - GEO

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103 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Homo sapiens		BW
GSE132683	Loss of ATF4 leads to functional aging-like attrition of adult hematopoietic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	BW	Yan Sun	Dec 29, 2021
GSE266161	RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	9	BW CSV MTX TSV	Giulia Arianna Moro	May 07, 2024
GSE236960	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BW TXT	Weijia Zang	Oct 31, 2023
GSE205342	ZBTB12-HERVH-LncRNA axis is a molecular barrier for dedifferentiation of human pluripotent stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW TXT	Dasol Han	Dec 26, 2022
GSE213191	Elevated expression of histone deacetylase HDAC8 suppresses arginine-proline metabolism in necrotizing enterocolitis [PCI34051 study]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW NARROWPEAK	Ting Guo	Sep 16, 2022
GSE185844	Scavenger Receptor SCARB2 Drives Hepatic Carcinoma Initiation by Enhancing MYC Transcriptional Activity and Supporting Cancer Stem Cell Traits.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	BW MTX TSV TXT	Yang Gao	Aug 11, 2023
GSE165418	Integrative Low-input Transcriptomic and Cistromic Analyses Identify CREB Target Genes in Cystic Epithelial Cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	16	BW	Zhiheng Liu	Jan 01, 2022
GSE183674	Pancreas agenesis mutations disrupt a lead enhancer controlling a developmental enhancer cluster	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	18	BROADPEAK BW NARROWPEAK	Irene Miguel-Escalada	Jun 30, 2022
GSE207673	Next-generation sequencing facilitates quantitative analysis of CON and PMB treated HepG2 cells and CreAlbMYC and CreAlbScarb2F/FMYC mice liver transcriptomes, and CUT&Tag analysis genome-wide maps of chromatin state in CTRLcas9 and SCARB2cas9 HepG2 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BW TXT	Yang Gao	Aug 11, 2023
GSE248639	Nynrin preserves hematopoietic stem cell function by inhibiting the mitochondrial permeability transition pore opening.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BW NARROWPEAK TXT	CHENGFANG ZHOU	Jun 01, 2024
GSE240258	PRMT1 inhibition activates the interferon pathway to potentiate antitumor immunity and enhance checkpoint blockade efficacy in melanoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BW GTF TXT	Liyuan Zhou	Nov 07, 2023
GSE167552	The stress response regulator HSF1 modulates natural killer cell anti-tumour immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED BW TAR TSV	Kathryn Grace Hockemeyer	Feb 26, 2021
GSE224816	Identifying STRN3-RARA as a new fusion gene for acute promyelocytic leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	22	BED BW	Xaingyu Pan	Apr 23, 2024
GSE159043	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BROADPEAK BW COV	Falong Lu	Jun 27, 2022
GSE197608	Short C-terminal Musashi-1 proteins regulate pluripotency states in embryonic stem cells	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	24	BEDGRAPH BW TXT XLSX	Gufa Lin	Nov 05, 2023
GSE262383	U4 inhibits premature cleavage and polyadenylation of pre-mRNAs [mRNA 3'-seq]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BW	chengguo yao	Jun 26, 2024
GSE175803	m6Am RNA methyltransferases PCIF1 regulate tumorigenesis of colorectal cancer and its immune responses to anti-PD-1 therapy	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BW CSV TSV TXT SRA Run Selector	Lingling Wang	Nov 12, 2022
GSE207516	Transcriptonal and epigenetic profiling of neuroblastoma cells based on CD49b expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BED BW TXT	Allan M Goldstein	Dec 05, 2023
GSE211263	Pbrm1 regulates interferon signaling in mouse AML	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BW NARROWPEAK TXT	Bin E Li	Jul 11, 2023
GSE247087	Co-repressor CDYL confers forebrain identity to human cortical organoids by negatively regulating NNAT	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BW	Xi-Yin Zhang	Nov 13, 2023