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94 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Homo sapiens		TSV
GSE229169	Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus	46	MTX TSV	Bing Ren	Oct 31, 2023
GSE199431	Position-dependent function of human sequence-specific transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Chlorocebus sabaeus Homo sapiens Mus musculus	56	BED FA TSV TXT	Christopher Benner	Apr 26, 2024
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155	BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE188639	A single-cell massively parallel reporter assay detects cell type specific cis-regulatory activity	Expression profiling by high throughput sequencing Other	Escherichia coli Homo sapiens Mus musculus	19	CSV MTX TSV	SIQI ZHAO	Nov 11, 2021
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE102580	A single cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	TSV SRA Run Selector	Rapolas Zilionis	Aug 01, 2018
GSE108639	Simultaneous quantifications of protein-DNA contacts and transcriptomics in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	TSV WIG	Koos Rooijers	Apr 21, 2019
GSE111301	mRNA sequencing of the mouse and human Hep-Orgs, Chol-Orgs and primary hepatocytes	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	29	CSV TSV TXT SRA Run Selector	Huili Hu	Nov 29, 2018
GSE113992	Non-coding regions are the main source of tumor-specific antigens	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	15	TSV	Krystel Vincent	Oct 18, 2018
GSE115612	scSLAM-seq reveals core features of transcription dynamics in single cells	Expression profiling by high throughput sequencing	Homo sapiens Murid betaherpesvirus 1 Mus musculus	124	H5 TSV TXT SRA Run Selector	Antoine-Emmanuel Saliba	Jul 10, 2019
GSE120522	Single cell transcriptome profiling of mouse and hESC-derived pancreatic progenitors	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	6	FA GTF MTX TSV TXT SRA Run Selector	Francis C Lynn	Dec 19, 2018
GSE123187	Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	92	TSV TXT SRA Run Selector	Anna Alemany	Dec 05, 2019
GSE127465	Single cell transcriptomics of human and mouse lung cancers reveals conserved myeloid populations across individuals and species	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	40	HTML MTX TSV SRA Run Selector	Rapolas Zilionis	Apr 09, 2019
GSE128066	A Bayesian mixture model for clustering droplet-based single cell transcriptomic data from population studies	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	11	MTX TSV SRA Run Selector	Zhe Sun	Mar 09, 2019
GSE128518	Lipid-associated macrophages control metabolic homeostasis in a Trem2-dependent manner	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	175	MTX TSV TXT SRA Run Selector	Ido Amit	Jun 27, 2019
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE132044	Systematic comparative analysis of single cell RNA-sequencing methods	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	3986	MTX TSV SRA Run Selector	Aviv Regev	Jun 01, 2019
GSE133110	Thyroid hormone action in human hepatocytes and the Cistromes of TRB1 and ChREBP in liver of mice	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	41	TSV SRA Run Selector	arturo mendoza	Nov 16, 2021
GSE133417	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BW MTX NARROWPEAK TSV	Caleb Lareau	Dec 31, 2021
GSE134125	The RNA hairpin binder TRIM71 modulates alternative splicing by repressing MBNL1	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BIGWIG TSV	Panagiotis Papasaikas	Aug 01, 2019