GEO Browser - GEO

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23 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Homo sapiens		BEDGRAPH
GSE184036	Single-cell profiling of histone modifications and transcription in developmental systems with EpiDamID	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	155	BEDGRAPH BROADPEAK HDF5 NARROWPEAK TSV	Jop Kind	Apr 01, 2022
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BEDGRAPH BW TXT SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE80154	Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	144	BEDGRAPH CEL WIG	James Bradner	Jan 29, 2018
GSE82199	LTR-retrotransposon control by tRNA-derived small RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	54	BEDGRAPH TXT SRA Run Selector	Robert A Martienssen	Jun 29, 2017
GSE98119	The energetics and physiological impact of cohesin extrusion	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE100733	LRPPRC-mediated folding of the mitochondrial transcriptome	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	28	BED BEDGRAPH TXT	Stefan J Siira	Nov 21, 2017
GSE111009	Cell type-dependent control of enhancer and p53 transcriptional activity by p63	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	98	BED BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Morgan A Sammons	Feb 11, 2019
GSE115787	The MybMuvB complex is required for YAP dependent transcription of mitotic genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BEDGRAPH TXT SRA Run Selector	Stefan Gaubatz	Jun 18, 2019
GSE120875	Genome wide mapping in regulatory T cells at steady state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BEDGRAPH	Dorina Avram	Aug 07, 2019
GSE121071	Trisomy of a ‘Down syndrome critical region’ globally amplifies transcription via HMGN1 overexpression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BEDGRAPH	James Bradner	Nov 13, 2018
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE144288	Targeting transcription-replication conflicts is an effective therapeutic principle for MYCN-driven neuroblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	85	BEDGRAPH TXT	Martin Eilers	Nov 27, 2020
GSE145779	Bcl11b binding and transcriptome analysis of Bcl11b-deficient MAIT cells at steady state and infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BEDGRAPH	Dorina Avram	Mar 22, 2021
GSE147432	TDP-43 dysfunction restricts dendritic complexity by inhibiting CREB activation and altering gene expression	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	20	BEDGRAPH FPKM_TRACKING SRA Run Selector	WEIJIN XU	Mar 26, 2020
GSE152855	MS2-TRIBE evaluates both protein-RNA interactions and nuclear organization of transcription by RNA editing	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BEDGRAPH SRA Run Selector	Jeetayu Biswas	Jun 20, 2020
GSE156855	AP-1 and TGFb cooperativity drives non-canonical Hedgehog signaling in resistant basal cell carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	38	BEDGRAPH	Anthony Oro	Aug 25, 2020
GSE159481	The mitochondrial single-stranded DNA binding protein directs RNA primer formation for mtDNA replication	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	10	BEDGRAPH SRA Run Selector	Claes M Gustafsson	Aug 29, 2022
GSE167487	A Variant in Human AIOLOS Impairs Adaptive Immunity by Interfering with IKAROS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BEDGRAPH NARROWPEAK TXT SRA Run Selector	Motoi Yamashita	May 01, 2021
GSE169121	Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61	BEDGRAPH BEDPE HIC TXT	Nadine Fournier	Jan 21, 2022