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771 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Danio rerio		TXT
GSE21024	Traf6 function in the innate immune response of zebrafish embryos	Expression profiling by high throughput sequencing	Danio rerio	4	SAM TXT SRA Run Selector	Oliver Stockhammer	Aug 01, 2010
GSE22068	Expanding the MicroRNA Targeting Code: A Novel Type of Site with Centered Pairing	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Danio rerio Homo sapiens	11	TXT SRA Run Selector	Jin-Wu Nam	Jun 25, 2010
GSE22472	Deep sequencing of the innate immune transcriptomic response of zebrafish embryos to Salmonella infection	Expression profiling by high throughput sequencing	Danio rerio	4	TXT SRA Run Selector	Oliver Stockhammer	Oct 26, 2010
GSE34493	A zebrafish model of intrahepatic cholangiocarcinoma by dual expression of hepatitis B virus X and hepatitis C virus core protein in liver	Expression profiling by high throughput sequencing	Danio rerio	4	TXT SRA Run Selector	Wangta Liu	Dec 02, 2014
GSE37453	Extensive alternative polyadenylation during zebrafish development	Expression profiling by high throughput sequencing	Danio rerio	14	BED BW TXT SRA Run Selector	Igor Ulitsky	Jun 17, 2012
GSE38042	The zebrafish embryo as an alternative model for the evaluation of liver toxicity using histopathology and expression profiling	Expression profiling by high throughput sequencing	Danio rerio	2	TXT SRA Run Selector	Marja Driessen	May 15, 2015
GSE38575	Whole Transcriptome RNA Sequencing Detects Multiple 1a,25-Dihydroxyvitamin D3-Sensitive Metabolic Pathways in Zebrafish Embryos	Expression profiling by high throughput sequencing	Danio rerio	40	TXT SRA Run Selector	Yuji Zhang	Jun 29, 2012
GSE38786	Id2a knockdown in zebrafish retina	Expression profiling by high throughput sequencing	Danio rerio	4	TXT SRA Run Selector	Taejoon Kwon	Aug 27, 2012
GSE39703	Transcriptomic analysis of zebrafish during development and homeostasis	Expression profiling by high throughput sequencing	Danio rerio	16	TXT SRA Run Selector	olivier armant	Jul 27, 2013
GSE40745	Transcriptomic analyses of Myc-induced zebrafish liver cancer	Expression profiling by high throughput sequencing	Danio rerio	8	TXT SRA Run Selector	Weiling Zheng	Apr 02, 2013
GSE41988	Targeting oncogene expression to endothelial cells induces proliferation of the myelo-erythroid lineage by repressing the notch pathway	Expression profiling by high throughput sequencing	Danio rerio	3	TXT SRA Run Selector	marina mione	Sep 19, 2013
GSE42847	Marker gene discovery for Staphylococcus epidermidis infection in zebrafish embryos	Expression profiling by high throughput sequencing	Danio rerio	36	TSV TXT	Wouter Veneman	Apr 01, 2013
GSE44075	Sperm but not oocyte DNA methylome is inherited by zebrafish early embyros	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Danio rerio	19	TXT WIG SRA Run Selector	Lan Jiang	May 20, 2013
GSE44233	Comparison of cardiomyocyte transcripts after knockdown of Gata4 in zebrafish embryos	Expression profiling by high throughput sequencing	Danio rerio	6	TXT WIG SRA Run Selector	Gabriel Rosenfeld	Feb 06, 2014
GSE44269	Canonical Nucleosome Organization at Promoters Forms During Genome Activation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Danio rerio	12	TXT WIG SRA Run Selector	Yong Zhang	Oct 18, 2013
GSE44352	Gene expression profiling of zebrafish embryos at 5 days post fertilization	Expression profiling by array Expression profiling by high throughput sequencing	Danio rerio	7	TSV TXT	Herman Pieter Spaink	Aug 01, 2013
GSE45410	MicroRNA-146 function in the innate immune response of zebrafish embryos to Salmonella typhimurium infection	Expression profiling by high throughput sequencing Non-coding RNA profiling by array	Danio rerio	17	TSV TXT	Annemarie H. Meijer	Sep 16, 2013
GSE45699	Transcriptome analysis of the Zebrafish model of Diamond-Blackfan Anemia from RPS19 deficiency via p53-dependent and -independent pathways	Expression profiling by high throughput sequencing	Danio rerio	3	TXT SRA Run Selector	yadong yang	Oct 09, 2013
GSE45706	RNA-sequencing project for zebrafish embryo and larva development	Expression profiling by high throughput sequencing	Danio rerio	9	TXT SRA Run Selector	Hongxing Yang	Apr 30, 2013
GSE46387	Gene Expression Analysis of Zebrafish Melanocytes, Iridophores, and Retinal Pigmented Epithelium Reveals Indicators of Biological Function and Developmental Origin	Expression profiling by high throughput sequencing	Danio rerio	35	TXT SRA Run Selector	Charles Higdon	Apr 26, 2013