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32 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Danio rerio		TAR
GSE132304	Tissue-specific transcriptomes reveal gene expression trajectories in two maturing skin epithelial layers in zebrafish embryos	Expression profiling by high throughput sequencing	Danio rerio	23	TAR XLSX SRA Run Selector	Shawn J. Cokus	Aug 21, 2019
GSE135767	Single Cell RNA Sequencing Analysis of Polystyrene Microplastic Exposed and control Zebrafish Intestine	Expression profiling by high throughput sequencing	Danio rerio	4	TAR SRA Run Selector	Gu Weiqing	Oct 01, 2019
GSE136109	Single Cell RNA Sequencing and Intestinal Microbial Analysis of Polystyrene Microplastic Exposed Zebrafish Intestine	Expression profiling by high throughput sequencing Other	Danio rerio	16	TAR XLSX	Gu Weiqing	Oct 01, 2019
GSE141664	Single-cell sequencing reveals heterogeneity effects of bisphenol A on zebrafish embryonic development	Expression profiling by high throughput sequencing	Danio rerio	6	TAR SRA Run Selector	Chen Ling	Sep 01, 2020
GSE144827	Epithelial planar bipolarity emerges from Notch-mediated asymmetric inhibition of Emx2	Expression profiling by high throughput sequencing	Danio rerio	2	TAR SRA Run Selector	Hernán López-Schier	Feb 06, 2020
GSE150751	Single-cell sequencing reveals heterogeneity effects of arsenic or/and 2,2-dichloroacetamide on zebrafish liver	Expression profiling by high throughput sequencing	Danio rerio	4	TAR SRA Run Selector	Chen Ling	Oct 01, 2020
GSE150839	Single-cell RNA-seq and ATAC-seq of zebrafish retina	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	2	TAR SRA Run Selector	Lei Du	Jun 24, 2020
GSE160140	Nrl-dependent and independent rod photoreceptor development in zebrafish [scRNA-Seq]	Expression profiling by high throughput sequencing	Danio rerio	2	TAR SRA Run Selector	Fei Liu	Oct 27, 2020
GSE160141	Nrl-dependent and independent rod photoreceptor development in zebrafish	Expression profiling by high throughput sequencing	Danio rerio	6	TAR	Fei Liu	Oct 27, 2020
GSE164574	Smad4 controls signaling robustness and morphogenesis by differentially contributing to the Nodal and BMP pathways	Expression profiling by high throughput sequencing	Danio rerio	1	TAR SRA Run Selector	Philip East	Apr 11, 2021
GSE165653	Single cell response landscape of graded Nodal signaling in zebrafish explants [single-cell RNA-seq]	Expression profiling by high throughput sequencing	Danio rerio	6	TAR SRA Run Selector	Tao cheng	Jan 28, 2021
GSE165654	Single cell response landscape of graded Nodal signaling in zebrafish explants	Expression profiling by high throughput sequencing	Danio rerio	51	TAR	Tao cheng	Jan 28, 2021
GSE165888	Heterogeneity effects of nanoplastics and lead on zebrafish intestine identified by single-cell sequencing	Expression profiling by high throughput sequencing	Danio rerio	4	TAR SRA Run Selector	Wu Bing	Feb 25, 2022
GSE166052	Single-cell RNA sequencing of zebrafish pancreatic cells during beta-cell regeneration	Expression profiling by high throughput sequencing	Danio rerio	5	TAR SRA Run Selector	Prateek Chawla	Jun 21, 2022
GSE186158	Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species	Expression profiling by high throughput sequencing	Danio rerio Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus Sus scrofa Xenopus tropicalis	7	TAR SRA Run Selector	Cangang Zhang	Jan 30, 2023
GSE186427	Activation of lineage competence in hemogenic endothelium precedes the formation of hematopoietic stem cell heterogeneity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	8	BW TAR	Zhixin Kang	Mar 24, 2023
GSE186957	Single-cell transcriptomes and runx2b−/− mutants reveal the genetic signatures of intermuscular bone formation in teleosts	Expression profiling by high throughput sequencing	Danio rerio	8	TAR TXT SRA Run Selector	yulong chen	Nov 04, 2021
GSE191002	Mycn regulates intestinal development through ribosomal biogenesis in a zebrafish model of Feingold syndrome 1 [single-cell RNA-seq]	Expression profiling by high throughput sequencing	Danio rerio	2	TAR	Tao cheng	Dec 17, 2021
GSE191003	Mycn regulates intestinal development through ribosomal biogenesis in a zebrafish model of Feingold syndrome 1	Expression profiling by high throughput sequencing	Danio rerio	14	TAR	Tao cheng	Dec 17, 2021
GSE193758	Toxicotranscriptomics of single cell RNA-Seq and conventional RNA-Seq in TCDD-exposed testicular tissue	Expression profiling by high throughput sequencing	Danio rerio	16	TAR XLSX	Tracie R Baker	May 28, 2022