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1490 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Arabidopsis thaliana		SRA Run Selector
GSE150422	Dissecting the co-transcriptome landscape of plants and microbiota	Expression profiling by high throughput sequencing	Acinetobacter sp. Leaf130 Arabidopsis thaliana Arthrobacter sp. Soil763 Burkholderia sp. Leaf177 Chryseobacterium sp. Leaf404 Exiguobacterium sp. Leaf187 Flavobacterium sp. Root935 Pedobacter sp. Leaf176 Plantibacter sp. Leaf1 Rhizobium sp. Leaf155	125	FNA TXT SRA Run Selector	Tatsuya Nobori	Apr 26, 2021
GSE148670	Transcriptome of Moesziomyces albugensis in response to different biotic factors (A. laibachii & SynCom) on A. thaliana leaves	Expression profiling by high throughput sequencing	Albugo laibachii Arabidopsis thaliana Moesziomyces sp. GD-2020a	15	TXT SRA Run Selector	Gunther Doehlemann	Jan 15, 2021
GSE29687	Cis- and trans- regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids	Expression profiling by high throughput sequencing	Arabidopsis arenosa Arabidopsis arenosa x Arabidopsis thaliana Arabidopsis suecica Arabidopsis thaliana	5	TXT SRA Run Selector	Z Jeffrey Jeffrey Chen	May 31, 2012
GSE42957	Early disruption of maternal-zygotic interaction and activation of defense-like responses in Arabidopsis interspecific incompatibility	Expression profiling by high throughput sequencing	Arabidopsis arenosa Arabidopsis thaliana Arabidopsis thaliana x Arabidopsis arenosa	18	TXT SRA Run Selector	Luca Comai	Jun 05, 2013
GSE20451	Arabidopsis thaliana and Arabidopsis lyrata degradomes	Expression profiling by high throughput sequencing	Arabidopsis lyrata Arabidopsis thaliana	4	TXT SRA Run Selector	Michael J Axtell	Apr 22, 2010
GSE63462	Evolutionary dynamics of DNA-binding sites and direct target genes of a floral master regulatory transcription factor [RNA-Seq]	Expression profiling by high throughput sequencing	Arabidopsis lyrata Arabidopsis thaliana	9	CSV SRA Run Selector	Jose M. Muino	Oct 11, 2015
GSE75071	On the Origin and Evolutionary Consequences of Gene Body DNA Methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Arabidopsis lyrata Arabidopsis thaliana Brassica oleracea Brassica rapa Capsella rubella Eutrema salsugineum	44	BED TSV SRA Run Selector	Robert J Schmitz	Jul 11, 2016
GSE69077	Comparative transcriptome analysis in response to heat stress in Arabidopsis thaliana and Arabidopsis lyrata	Expression profiling by high throughput sequencing	Arabidopsis lyrata subsp. lyrata Arabidopsis thaliana	12	GFF XLSX SRA Run Selector	Ales Pecinka	Aug 01, 2015
GSE69222	Comparative transcriptome profiling of Arabidopsis lyrata and Arabidopsis thaliana	Expression profiling by high throughput sequencing	Arabidopsis lyrata subsp. lyrata Arabidopsis thaliana	7	GFF XLSX SRA Run Selector	Ales Pecinka	Aug 01, 2015
GSE10968	Highly integrated epigenome maps in Arabidopsis - transcriptome sequencing	Expression profiling by high throughput sequencing	Arabidopsis thaliana	4	TXT SRA Run Selector	Joseph R Ecker	Apr 21, 2008
GSE11070	A link between RNA metabolism and silencing affecting Arabidopsis development	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by genome tiling array	Arabidopsis thaliana	22	CEL TXT SRA Run Selector	Joseph R Ecker	May 15, 2008
GSE21323	Protein arginine methyltransferase AtPRMT5 is involved in pre-mRNA splicing in Arabidopsis thaliana	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	BEDGRAPH SRA Run Selector	xiaofeng cao	Oct 07, 2010
GSE24198	Deep-sequencing of total RNA from manually dissected wild-type and kyp-2m/KYPp Arabidopsis embryos	Expression profiling by high throughput sequencing	Arabidopsis thaliana	6	TXT SRA Run Selector	Marc William Schmid	Jun 01, 2011
GSE24644	Extensive imprinted gene expression in Arabidopsis endosperm	Expression profiling by high throughput sequencing	Arabidopsis thaliana	11	TXT SRA Run Selector	Toshiro Nishimura	Mar 10, 2011
GSE24696	RNA-seq of Arabidopsis spl7 identifies two genes required for copper acquisition and a copper dependence of iron homeostasis	Expression profiling by high throughput sequencing	Arabidopsis thaliana	8	TXT SRA Run Selector	Ute Kramer	Oct 14, 2013
GSE24970	Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations: RNA-Seq	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	TXT SRA Run Selector	Hang He	Dec 31, 2010
GSE25404	Transcript profiling of wild-type and dcl1-5 early globular embryos	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	TXT SRA Run Selector	Michael D Nodine	Dec 01, 2010
GSE27292	High-resolution analysis of parent-of-origin-allelic expression in Arabidopsis seeds	Expression profiling by high throughput sequencing Other	Arabidopsis thaliana	2	TXT SRA Run Selector	Marc Rehmsmeier	Apr 30, 2011
GSE28398	Histone modifications of Arabidopsis thaliana (aerial tissue)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	12	BED SRA Run Selector	Chongyuan Luo	Jun 06, 2011
GSE29719	mRNA-Seq of central cells from the Arabidopsis thaliana female gametophyte	Expression profiling by high throughput sequencing	Arabidopsis thaliana	2	BAM TXT SRA Run Selector	Marc William Schmid	Jan 26, 2012