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4343 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		MTX
GSE240583	Baf155 establishes chromatin priming to promote hematopoietic regeneration and function [single cell multiome - ATAC + GEX]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	ARROW MTX RDS TSV	Changxu Fan	Jul 09, 2024
GSE240585	Baf155 controls hematopoietic differentiation and regeneration through chromatin priming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	ARROW BW MTX TSV	Changxu Fan	Jul 08, 2024
GSE95430	Single cell RNA-seq of eight thousand epithelium cells from the mammary glands of adult mice	Expression profiling by high throughput sequencing	Mus musculus	2	BAI MTX TSV SRA Run Selector	Gordon K Smyth	Nov 20, 2017
GSE103275	Single cell RNA-seq of mouse mammary gland epithelium cells	Expression profiling by high throughput sequencing	Mus musculus	6	BAI MTX TSV	Gordon K Smyth	Nov 20, 2017
GSE134388	ALKBH5 regulates anti-PD-1 therapy response by modulating lactate and suppressive immune cell accumulation in tumor microenvironment	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BB MTX TSV TXT XLSX SRA Run Selector	Na Li	Aug 10, 2020
GSE146292	Stepwise chromatin and transcriptional acquisition of an intraepithelial lymphocyte program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BB BED BIGWIG H5 MTX NARROWPEAK TSV SRA Run Selector	Tiago Castro	Jan 04, 2021
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE110038	Hic1 defines quiescent mesenchymal progenitor subpopulations with distinct functions and fates in skeletal muscle regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BED MTX TSV	Tully Michael Underhill	Dec 05, 2019
GSE124901	Functional stem cell aging dictated by skin tissue microenvironment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED MTX TSV TXT SRA Run Selector	Yejing Ge	Dec 31, 2019
GSE128818	Aberrant phase separation of transcription factors in human developmental disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Gallus gallus Mus musculus	19	BED BW MTX TSV SRA Run Selector	Denes Hnisz	May 07, 2020
GSE130884	Identification of tissue regulatory T cell precursors in lymphoid organs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	162	BED BIGWIG H5 MTX TSV	Michael Delacher	Jan 01, 2020
GSE131675	Generating in vivo somatic mouse mosaics with locus-specific, stably-integrated transgenic elements for studies of gene function in development and tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED BW CSV MTX TSV	AGCT Core	Sep 10, 2019
GSE133244	Single-Cell Chromatin Accessibility Maps Reveal the Regulatory Programs Driving Early Mouse Organogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BW MTX TAB TXT SRA Run Selector	Bertie Gottgens	Feb 05, 2020
GSE133648	Escape of hair follicle stem cells from a defective niche	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED CSV MTX TSV TXT	Chi Zhang	Sep 30, 2021
GSE134311	scRCAT-seq: simultaneously profile RNA TSS and TES at single-cell level	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus synthetic construct	116	BED CSV GTF MTX TSV TXT SRA Run Selector	Jiawei Zhong	Aug 24, 2020
GSE139950	Chromatin-accessibility estimation from single-cell ATAC data with scOpen	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED MTX TSV SRA Run Selector	Zhijian Li	Sep 17, 2021
GSE142366	Dynamic transcriptional responses to injury of regenerative and non-regenerative cardiomyocytes revealed by single-nucleus RNA sequencing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	18	BED CSV H5 MTX TBI TSV	Zhaoning Wang	Mar 18, 2020
GSE147768	Single-cell ATAC-Sequencing of adipose Treg cells	Expression profiling by high throughput sequencing	Mus musculus	1	BED MTX TSV SRA Run Selector	Bin Li	Jul 15, 2021
GSE148695	SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	148	BED BW MTX TSV	Wei Gu	Oct 05, 2021
GSE149622	Skin-resident innate lymphoid cells converge on a pathogenic effector state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED FA MTX TBI TSV SRA Run Selector	Elena Torlai Triglia	Dec 14, 2020