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91 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		COV
GSE117728	A DNMT3A PWWP mutation leads to methylation of bivalent chromatin and postnatal growth retardation in mice	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	79	COV TXT SRA Run Selector	Felix Krueger	Mar 18, 2019
GSE222335	A Molecular Signature Defining Exercise Adaptation and In Vivo Reprogramming in Skeletal Muscle	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	COV	Kevin Murach	Dec 01, 2023
GSE245426	A maternal-effect Padi6 variant causes nuclear and cytoplasmic abnormalities in oocytes as well 2 as failure of epigenetic reprogramming and zygotic genome activation in embryos	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	193	COV VCF	Francesco Cecere	Oct 18, 2023
GSE109545	A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED COV CSV SRA Run Selector	Myriam Hemberger	May 02, 2018
GSE261788	AMAR-seq: automated multimodal sequencing of DNA methylation, chromatin accessibility, and RNA expression with single-cell resolution	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	83	COV TXT	Xi Zeng	Mar 21, 2024
GSE152349	Ablation of DNA-methyltransferase 3A in skeletal muscle does not affect energy metabolism or exercise capacity	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	COV	Lars Roed Ingerslev	Jan 25, 2021
GSE156409	Age-associated cryptic transcription in mammalian stem cells is linked to permissive chromatin at cryptic promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BED BW COV TXT	Weiwei Dang	Jul 15, 2021
GSE121437	Ageing affects DNA methylation and transcriptional cell-to-cell variability in muscle stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	1043	COV	Felix Krueger	Aug 22, 2019
GSE151543	Aging imparts cell-autonomous dysfunction to regulatory T cells during recovery from influenza pneumonia	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	COV	Benjamin D. Singer	Feb 18, 2021
GSE195556	An engineered Sox17 induces somatic to neural stem cell fate transition independently from pluripotency reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	COV MTX TSV	Mingxi WENG	Jul 19, 2023
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE245383	Astrocyte-produced HB-EGF limits autoimmune CNS pathology	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	14	COV	Mathias Linnerbauer	Dec 01, 2023
GSE140314	Cancer prevention by phenethyl isothiocyanate (PEITC) in transgenic adenocarcinoma of the mouse prostate (TRAMP) mice	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	COV TXT	Renyi Wu	Jan 01, 2023
GSE247019	Cancer-associated DNA Hypermethylation of Polycomb Targets Requires DNMT3A Dual Recognition of histone H2AK119 Ubiquitination and the Nucleosome Acidic Patch	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	134	BW COV	Kristjan H. Gretarsson	Aug 28, 2024
GSE191211	Cell-type specific DNA methylome signatures reveal epigenetic mechanisms for neuronal diversity and neurodevelopmental disorder	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	COV TXT	Peng Jin	Aug 24, 2022
GSE103663	Characterization and metabolic synthetic lethal testing in a new model of SDH-loss familial pheochromocytoma and paraganglioma	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	28	BED COV CSV	John Andrew Smestad	Nov 21, 2017
GSE155994	Comparative analysis of glioblastoma initiating cells and patient-matched EPSC-derived neural stem cells as a discovery tool and drug matching strategy	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens Mus musculus	156	COV IDAT	Silvia Marino	Sep 17, 2021
GSE154367	Comparative analysis of glioblastoma initiating cells and patient-matched EPSC-derived neural stem cells as a discovery tool and drug matching strategy [Seq]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	COV CSV SRA Run Selector	Silvia Marino	Sep 17, 2021
GSE224447	DNA methylation and gene expression changes in mice induced by parabiosis and recovery	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by array	Homo sapiens Macaca mulatta Mus musculus Rattus Rattus norvegicus	233	COV IDAT TXT	Jesse Poganik	Apr 21, 2023
GSE213723	DNA methylation entropy as a measure of stem cell replication and aging	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	144	COV TXT	Jean-Pierre Issa	Sep 30, 2022