GEO Browser - GEO

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1374 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Mus musculus		BED
GSE23619	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes (Illumina sequencing data)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BED FA TXT SRA Run Selector	Christopher Benner	Jan 01, 2011
GSE23622	Mechanisms Establishing TLR4-Responsive Activation States of Inflammatory Response Genes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	55	BED FA TXT	Christopher Benner	Jan 01, 2011
GSE27037	Regulating RNA Polymerase Pausing and Elongation in Embryonic Stem Cell Transcription	Expression profiling by high throughput sequencing	Mus musculus	5	BED SRA Run Selector	Josh Waterfall	Apr 01, 2011
GSE28666	RNA sequencing reveals two major classes of gene expression levels in metazoan cells	Expression profiling by high throughput sequencing	Mus musculus	2	BED BEDGRAPH TXT SRA Run Selector	Daniel Hebenstreit	Apr 16, 2011
GSE28500	Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23	BED CEL	Feizhen Wu	Apr 21, 2011
GSE28532	Genome-wide Regulation of 5hmC, 5mC and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells (ChIP-seq data)	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	BED SRA Run Selector	Feizhen Wu	Apr 21, 2011
GSE30198	Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq	Expression profiling by high throughput sequencing	Canis lupus familiaris Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus	26	BED SRA Run Selector	Adnan Derti	Jun 25, 2011
GSE30761	Mammalian X upregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Mus musculus Mus musculus x Mus spretus	60	BED BIGWIG CEL GFF PAIR TXT	Xinxian Deng	Jul 19, 2011
GSE26512	Transcriptional activity regulates alternative cleavage and polyadenylation	Expression profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Zhe Ji	Aug 15, 2011
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE33024	Sequentially acting Sox transcription factors in neural lineage development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	27	BED CEL	Rickard Sandberg	Nov 01, 2011
GSE33060	Sequentially acting Sox transcription factors in neural lineage development [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	6	BED TXT SRA Run Selector	Rickard Sandberg	Nov 01, 2011
GSE25115	Interferon-alpha mediates the development of autoimmunity by direct tissue toxicity and through immune-cell recruitment mechanisms	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	5	BED TXT SRA Run Selector	Weijia Zhang	Nov 03, 2011
GSE31183	ZFP57/KAP1 recognize a methylated hexanucleotide to affect the chromatin and DNA methylation of imprinting control regions in embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED BEDGRAPH	Simon Quenneville	Nov 07, 2011
GSE25549	Polycomb Protein Ezh1 Promotes RNA Polymerase II Elongation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	30	BED TXT SRA Run Selector	Kambiz Mousavi	Nov 23, 2011
GSE27016	Estimates of total imprint number withstand transcriptome test	Expression profiling by high throughput sequencing	Mus musculus	2	BED TXT SRA Run Selector	Brian DeVeale	Dec 01, 2011
GSE22959	Sequencing of the non-ribosomal transcriptome allows the simultaneous identification of protein-coding and non-protein-coding RNAs	Expression profiling by high throughput sequencing	Mus musculus	24	BED BEDGRAPH SRA Run Selector	Florian M Pauler	Dec 06, 2011
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster Mus musculus	22	BED CEL SRA Run Selector	Alexander (Garrett) Garruss	Dec 22, 2011
GSE27921	Intragenic enhancers act as alternative promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	9	BED SAM	Monika S Kowalczyk	Jan 30, 2012
GSE30943	Genome-wide profiling of gene expression of normal and Tbx20 knockout adult mouse whole heart	Expression profiling by high throughput sequencing	Mus musculus	10	BED TXT SRA Run Selector	Noboru Jo Sakabe	Feb 10, 2012