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4765 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Mus musculus		TXT
GSE224433	An ERK-dependent molecular switch antagonizes fibrosis and promotes regeneration in spiny mice (Acomys)	Expression profiling by high throughput sequencing	Acomys cahirinus Mus musculus	6	H5 TXT	PHILIP LIJNZAAD	Apr 28, 2023
GSE186346	Extensive sex differences in depression-linked variants functionally assayed in mouse brain [Hippocampus]	Expression profiling by high throughput sequencing Other	Adeno-associated virus 9 Mus musculus	25	TXT SRA Run Selector	Joseph Dougherty	Feb 10, 2023
GSE186347	Extensive sex differences in depression-linked variants functionally assayed in mouse brain [P0&P10]	Expression profiling by high throughput sequencing Other	Adeno-associated virus 9 Mus musculus	44	TXT SRA Run Selector	Joseph Dougherty	Feb 10, 2023
GSE222184	Extensive sex differences in depression-linked variants functionally assayed in mouse brain [Hippocampus II]	Expression profiling by high throughput sequencing	Adeno-associated virus 9 Mus musculus	38	TXT	Joseph Dougherty	Feb 10, 2023
GSE219071	mDRIP-seq is a high-throughput method for quantitative R-loop landscape profiling	Other Expression profiling by high throughput sequencing	Arabidopsis thaliana Escherichia coli Homo sapiens Mus musculus Oryza sativa Saccharomyces cerevisiae	384	BW TXT	Changbin Sun	Jun 11, 2024
GSE201761	Next Generation Sequencing and Quantitative Analysis of Mus musculus and Arvicanthis niloticus Olfactory Epithelium Transcriptomes	Expression profiling by high throughput sequencing	Arvicanthis niloticus Mus musculus	12	TXT	Ben-Yang Liao	May 01, 2022
GSE182553	HDAC1/2 is indispensable for mouse and bovine ZGA via regulating distribution of H3K27ac and H3K4me3 [RNA-seq]	Expression profiling by high throughput sequencing	Bos taurus Mus musculus	26	TXT SRA Run Selector	Kun Zhang	May 21, 2022
GSE237418	The Role and Mechanism of TEAD4 in Preimplantation Embryonic Development in Mice and Cattle	Expression profiling by high throughput sequencing	Bos taurus Mus musculus	16	TXT	Bingjie Hu	Jul 15, 2024
GSE249786	Mitochondrial RNA-seq and total RNA-seq of 293T, HeLa, and N2a cells; RIP-seq of SUPV3L1, ceSUPV3L1, ATP5B, and TRAP1; Small RNA-seq of 293T mitochondrial fractions	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Caenorhabditis elegans Homo sapiens Mus musculus	36	BW CSV TXT	Xu Liu	Dec 19, 2023
GSE151761	Innovations in primate interneuron repertoire	Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus Mustela putorius furo	123	TXT SRA Run Selector	Fenna Marie Krienen	Jun 04, 2020
GSE161645	scAAVengr, a transcriptome-based pipeline for quantitative ranking of engineered AAVs with single-cell resolution	Expression profiling by high throughput sequencing	Callithrix jacchus Macaca fascicularis Mus musculus	147	CSV MTX TSV TXT SRA Run Selector	Leah Byrne	Oct 19, 2021
GSE168395	Signaling modality within gp130 receptor enhances tissue regeneration	Expression profiling by high throughput sequencing	Canis lupus familiaris Mus musculus	18	TXT	Denis Evseenko	Jan 24, 2024
GSE192740	Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches (single cells)	Expression profiling by high throughput sequencing	Danio rerio Gallus gallus Homo sapiens Macaca mulatta Mesocricetus auratus Mus musculus Sus scrofa	132	H5 RDS TSV TXT SRA Run Selector	Liesbet Martens	Jan 11, 2022
GSE192742	Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches	Expression profiling by high throughput sequencing	Danio rerio Gallus gallus Homo sapiens Macaca mulatta Mesocricetus auratus Mus musculus Sus scrofa	147	CSV H5 JSON PNG TXT	Liesbet Martens	Jan 11, 2022
GSE223263	Autonomous transposons tune their sequences to ensure somatic suppression.	Other Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	153	BW TXT	IBRAHIM AVSAR ILIK	Jan 08, 2024
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE167518	Transcriptional-Regulatory Convergence Across Functional MDD Risk Variants Identified by Massively Parallel Reporter Assays [Expt2]	Expression profiling by high throughput sequencing	Escherichia coli Mus musculus	13	TXT SRA Run Selector	Joseph Dougherty	Jun 30, 2021
GSE211736	Joint epigenome profiling reveals cell-type-specific gene regulatory programs in human cortical organoids	Expression profiling by high throughput sequencing Other	Escherichia coli Homo sapiens Mus musculus	27	BW FA PICKLE TAB TSV TXT SRA Run Selector	Boyan Bonev	Aug 23, 2023
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE108116	UTX and 53BP1 co-regulate genetic programs for neural differentiation of human embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BED TXT	Beisi Xu	Feb 15, 2019