GEO Browser - GEO

Series

Samples

Platforms

DataSets

171 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Mus musculus		NARROWPEAK
GSE247511	Cadherins modulate the self-organizing potential of gastruloids	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	83	BW LOOM NARROWPEAK TAR	ALEXANDRE MAYRAN	Jul 18, 2024
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE140363	Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	122	BED BEDGRAPH BROADPEAK BW CSV HIC NARROWPEAK SRA Run Selector	Nishana Mayilaadumveettil	Apr 14, 2020
GSE151704	FTO mediates LINE1 m6A demethylation and chromatin regulation in mESCs and mouse tissues	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	104	CSV NARROWPEAK TXT SRA Run Selector	Chuan He	May 05, 2022
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus synthetic construct	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE166426	Histone H1 regulates non-coding RNA turnover on chromatin in a m6A-dependent manner	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BED BW NARROWPEAK SRA Run Selector	Maria Gomez	Sep 13, 2022
GSE183403	METTL14 is a chromatin regulator independent of RNA N6-methyladenosine	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	98	BED BIGWIG NARROWPEAK TXT	Xiaoyang Dou	Aug 16, 2024
GSE183806	Chromatin architecture of B cell development during the humoral immune response	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BIGWIG BW MCOOL NARROWPEAK SF	Ashley Stephen Doane	Sep 09, 2021
GSE201655	An activity-specificity trade-off encoded in human transcription factors	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	100	CSV MTX NARROWPEAK TAB TSV	Alexandre P Magalhaes	Feb 27, 2024
GSE203190	Tumor-induced double positive T cells display distinct lineage commitment mechanisms and functions	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	49	CSV NARROWPEAK TXT	Bic MSKCC	May 20, 2022
GSE206875	A non-coding single nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	24	NARROWPEAK ZIP	Daniel Schramek	Sep 12, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Other Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE211214	Identifying gene combinations for targeting innate immune cells to enhance T cells activation	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	81	BW NARROWPEAK TAR	Oren Parnas	Sep 13, 2023
GSE212252	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	80	BROADPEAK HIC NARROWPEAK TAB	Luca Massimino	Sep 12, 2022
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE214692	Dissecting developmental disorders caused by CTCF mutation at R567	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	71	BW CSV HIC MTX NARROWPEAK TSV	gongcheng Hu	May 05, 2024
GSE216761	Ectomesenchymal Six1 controls mandibular skeleton formation.	Other Expression profiling by high throughput sequencing	Mus musculus	12	BW NARROWPEAK TXT	Songyuan Luo	Mar 10, 2023
GSE217256	Single-nucleus multiomic mapping of m6A methylome and transcriptome in native populations of cells with sn-m6A-CT	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	CSV MTX NARROWPEAK TSV	Kiyofumi Hamashima	Sep 05, 2023
GSE218740	The opened-up transcriptome with H3K36me3 modification in murine fetal pancreatic epithelial cells	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	NARROWPEAK TSV TXT	Ping Lu	Dec 22, 2023