GEO Browser - GEO

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772 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Mus musculus		BW
GSE217745	Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW	Xiangzheng Liu	Nov 01, 2023
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE212002	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	120	BW MTX TSV TXT	Chen Wang	Jan 20, 2023
GSE211935	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	12	BW TXT	Chen Wang	Jan 20, 2023
GSE211937	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation [Single MK RNAseq]	Expression profiling by high throughput sequencing	Mus musculus	90	BW TXT	Chen Wang	Jan 20, 2023
GSE260638	A MOZ-TIF2 leukemic mouse model displays KAT6 inhibitor-sensitive H3K23 propionylation and dysregulation of a set of highly active developmental genes [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	40	BW	Mitzi I Kuroda	Jul 03, 2024
GSE213880	A MTA2-SATB2 chromatin complex restrains colonic plasticity toward small intestine by retaining HNF4A at colonic chromatin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BW	Wei Gu	Mar 07, 2024
GSE246223	A Mouse Model for Metabolic Dysfunction-associated Steatotic Liver Disease and Hepatocellular Carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	160	BED BW	Byung-Kwan Jeong	Jun 16, 2024
GSE166922	A Nuclear factor I-X mediated regulatory network governs the balance of hematopoietic stem and progenitor cells during hematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	24	BW RDATA SRA Run Selector	Shannon McKinney-Freeman	Dec 02, 2022
GSE196946	A Synthetic Lethality Screen Reveals ING5 as a Genetic Dependency of Catalytically Dead Set1A/COMPASS in Mouse Embryonic Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	94	BW	Bercin K Cenik	Mar 28, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE137285	A WIZ/Cohesin/CTCF complex anchors DNA loops to define gene expression and cell identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	BW	Jill Dowen	Apr 14, 2020
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021
GSE245549	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BW MTX TAB TSV	Shuchang Liu	Jun 06, 2024
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE188525	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED BW MTX TSV	Anna Bigas	Apr 15, 2024
GSE164118	A distal Foxp3 enhancer enables interleukin-2 dependent thymic Treg cell lineage commitment for robust immune tolerance	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	46	BW TXT	Beisi Xu	Mar 16, 2021
GSE148608	A dual functions of autism-related chromatin remodeler CHD8 in developmental and adult neurogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW TXT SRA Run Selector	Richard Lu	Oct 17, 2022