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180 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Mus musculus		BIGWIG
GSE229285	ATAC-seq and RNA-seq of Notch signaling response in RTE cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BIGWIG	Juan Carlos Zuniga-Pflucker	Apr 12, 2023
GSE141525	The role of histone H3K27 acetylation for enhancer activity in embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	69	BIGWIG NARROWPEAK TXT SRA Run Selector	Zhuqiang Zhang	Feb 09, 2020
GSE159154	YBX1 is selectively required for maintaining myeloid leukemia cell survival by regulating mRNA stability in an m6A-dependent manner	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	24	BIGWIG	Haojian Zhang	Apr 01, 2021
GSE163293	Histone methylation regulator PTIP orchestrates inflammatory responses via modulating acetylation state of cis-regulatory elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	62	BIGWIG	Haojian Zhang	Dec 30, 2022
GSE218610	Dynamics of m6A RNA methylome during leukemogenesis reveals a role of PRMT6-MFSD2A signaling axis in maintaining AML stem cells.[RIP-seq]	Expression profiling by high throughput sequencing	Mus musculus	4	BIGWIG NARROWPEAK TXT	Haojian Zhang	Jun 20, 2023
GSE218611	Dynamics of m6A RNA methylome during leukemogenesis reveals a role of PRMT6-MFSD2A signaling axis in maintaining AML stem cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BIGWIG NARROWPEAK TXT	Haojian Zhang	Jun 20, 2023
GSE227011	Selective translation of nuclear mitochondrial respiratory proteins reprograms succinate metabolism in AML development and chemoresistance.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	32	BIGWIG	Haojian Zhang	Sep 24, 2024
GSE239365	MCRS1 sensitizes pancreatic cancer to T cell immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BIGWIG BROADPEAK	Xiaofei Yu	Oct 14, 2024
GSE186894	STAG2 promotes the myelination transcriptional program in oligodendrocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	26	BIGWIG	Hongtao Yu	Aug 23, 2022
GSE184776	Xist exerts gene-specific silencing during XCI maintenance and impacts lineage-specific cell differentiation and proliferation during hematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	53	BED BIGWIG NARROWPEAK TXT	Eda Yildirim	Jul 15, 2022
GSE156601	RNA-seq on Zfp961 GFP flox/flox mESCs to verify ERVKs repression by Zfp961.	Expression profiling by high throughput sequencing	Mus musculus	10	BIGWIG TDF SRA Run Selector	Bo Yang	Dec 01, 2021
GSE156604	Krab-ZFPs Inhibit Retrovirus by Targeting PBS Sites	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BIGWIG TDF	Bo Yang	Dec 01, 2021
GSE180988	Chromatin-mediated alternative splicing regulates cocaine reward behavior	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	89	BIGWIG BW TXT SRA Run Selector	Song-Jun Xu	Jul 31, 2021
GSE188417	The PAF1 Complex Regulates Transcriptional Termination and Reinitiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	122	BIGWIG BW	Aiwei Wu	Nov 06, 2024
GSE120393	Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	107	BIGWIG BROADPEAK FPKM_TRACKING HIC NARROWPEAK TXT SRA Run Selector	Chia-Lin Wei	Jan 07, 2020
GSE269834	PPARg T166 phosphorylation-mediated lipid synthesis sustains the reparative function of macrophages during tissue repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BIGWIG	Yuxin Wang	Jul 30, 2024
GSE232538	The Lysine Demethylase KDM7A Regulates Immediate Early Genes in Neurons.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	43	BIGWIG BW	Yifan Wang	Aug 21, 2023
GSE201562	Downstream targeted genes of Satb2 regulate synaptic formation and axonogenesis in developing cerebral cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	7	BIGWIG NARROWPEAK	Yaqiong Wang	Aug 24, 2022
GSE245774	ASH2L mediates epidermal differentiation and hair follicle morphogenesis via the regulation of the Notch signaling pathway activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	8	BIGWIG	Qirui Wang	Mar 18, 2024
GSE124463	Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 01, 2020