GEO Browser - GEO

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180 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing	Mus musculus		BIGWIG
GSE124463	Promoter capture Hi-C identifies long-range promoter contact dynamics in response to diet and the development of non-alcoholic fatty liver disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Jan 01, 2020
GSE135808	Topoisomerase 1 Nicking-dependent HP1gamma Engagement Mediates Acute Activation of Phase-separated Enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	167	BED BEDGRAPH BIGWIG	Yuliang Tan	Aug 04, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE157359	Cell type-specific oxidative stress genomic signatures in the globus pallidus of dopamine depleted mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	70	BED BIGWIG NARROWPEAK TXT SRA Run Selector	Alyssa J Lawler	Sep 07, 2020
GSE168129	Mutations in BCOR, a novel co-repressor of OTX2/CRX, cause pediatric inherited retinal degeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BIGWIG TXT XLSX SRA Run Selector	Awais Javed	Sep 10, 2022
GSE169519	Direct neuronal reprogramming by temporal identity factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED BIGWIG H5 LOOM SF TSV TXT SRA Run Selector	Awais Javed	May 04, 2023
GSE178556	Wdr5	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	43	BED BIGWIG BW GTF NARROWPEAK	Rajesh C Rao	Jun 22, 2021
GSE183403	METTL14 is a chromatin regulator independent of its RNA N6-methyladenosine methyltransferase activity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	98	BED BIGWIG NARROWPEAK TXT	Xiaoyang Dou	Aug 16, 2024
GSE183619	BAF complex cooperates with c-Myc to orchestrate early fate decisions of CD8 T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	101	BED BIGWIG CEL TAB	Douglas R Green	Apr 24, 2022
GSE184776	Xist exerts gene-specific silencing during XCI maintenance and impacts lineage-specific cell differentiation and proliferation during hematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	53	BED BIGWIG NARROWPEAK TXT	Eda Yildirim	Jul 15, 2022
GSE189590	Ikaros family proteins redundantly regulate temporal patterning in the developing mouse retina	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED BIGWIG SF TXT	Awais Javed	Dec 22, 2022
GSE194192	The molecular basis of specific functions of Brachyury and Eomes for mesoderm and endoderm lineage specification	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED BIGWIG TXT	Sebastian Arnold	Jul 26, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE198564	An Epigenetic Memory of Inflammation Induces Context-Dependent Lineage Plasticity in the Pancreas with Divergent Phenotypic Outcomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	115	BED BIGWIG BW H5 MTX TSV TXT	Rohit Chandwani	Oct 24, 2023
GSE199426	PPARγ lipodystrophy mutants reveal intermolecular interactions required for enhancer activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BED BIGWIG TXT	Susanne Mandrup	Oct 27, 2022
GSE200892	Olig1/2-expressing intermediate lineage progenitors are predisposed to PTEN/p53-loss-induced gliomagenesis and harbor specific therapeutic vulnerabilities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	30	BED BIGWIG	Richard Q. Lu	Jan 03, 2023
GSE205437	The NFIA-ETO2 fusion blocks terminal erythroid maturation and induces pure erythroid leukemia in cooperation with mutant TP53	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BED BIGWIG	Jonathan Seguin	Feb 09, 2023
GSE205449	Multimodal spatiotemporal transcriptomic resolution of embryonic palate osteogenesis	Expression profiling by high throughput sequencing	Mus musculus	28	BED BIGWIG CSV JSON MTX PNG TSV	Ryan Dale	Aug 07, 2023
GSE211545	Opposing transcriptional circuits governing skeletal muscle development and maturation revealed at single nuclear resolution.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED BIGWIG MTX TSV	kenian chen	May 31, 2023
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022