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3641 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Mus musculus		TXT
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE122009	A Multiplexed Barcodelet Single-Cell RNA-Seq Approach Elucidates Combinatorial Signaling Pathways that Drive ESC Differentiation	Expression profiling by high throughput sequencing	Mus musculus	20	CSV FA MTX TSV TXT SRA Run Selector	Richard I Sherwood	May 26, 2020
GSE159763	(bulk RNAseq) An extracellular vesicle-related gene expression signature identifies high-risk patients in medulloblastoma	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	14	TXT SRA Run Selector	Kornelius Kerl	Dec 11, 2020
GSE127997	(single-cell RNAseq) An extracellular vesicle-related gene expression signature identifies high-risk patients in medulloblastoma	Expression profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Kornelius Kerl	Dec 11, 2020
GSE125567	3’Pool-seq: an optimized cost-efficient and scalable method of whole-transcriptome gene expression profiling (Run0004)	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Hualin Xi	Sep 30, 2019
GSE125568	3’Pool-seq: an optimized cost-efficient and scalable method of whole-transcriptome gene expression profiling (Run0050)	Expression profiling by high throughput sequencing	Mus musculus	24	TXT SRA Run Selector	Hualin Xi	Sep 30, 2019
GSE125569	3’Pool-seq: an optimized cost-efficient and scalable method of whole-transcriptome gene expression profiling (Run0064)	Expression profiling by high throughput sequencing	Mus musculus	32	TXT SRA Run Selector	Hualin Xi	Sep 30, 2019
GSE169071	3'mRNA sequencing of hepatic RNA (MACE) at the time points 24h/48h after acetaminophen (APAP) (300mg/kg) administration	Expression profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Malte Bachmann	Dec 31, 2021
GSE227750	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	150	BW MTX TXT	Yunshun Chen	Sep 08, 2023
GSE227748	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [RNASeq_MEC]	Expression profiling by high throughput sequencing	Mus musculus	9	TXT	Yunshun Chen	Sep 08, 2023
GSE227749	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells [RNASeq_T8]	Expression profiling by high throughput sequencing	Mus musculus	6	TXT	Yunshun Chen	Sep 08, 2023
GSE244952	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	25	BW TXT XLS XLSX	Guillermo Barreto	Sep 27, 2024
GSE129622	4-Methylimidazole (4-MEI) exposure in liver and lung of B6C3F1 mice exposed to four concentrations for 2, 5 and 28 days	Expression profiling by high throughput sequencing	Mus musculus	359	TXT SRA Run Selector	Michael B. Black	Apr 30, 2020
GSE184602	4DNESCX7WHJ1 - sci-RNA-seq on mESCs differentiated to embryoid body	Expression profiling by high throughput sequencing	Mus musculus	10	TXT SRA Run Selector	4DN DCIC	Sep 24, 2021
GSE178512	4T1 Exsporosi	Expression profiling by high throughput sequencing	Mus musculus	15	TXT SRA Run Selector	Li Yang	Jun 21, 2021
GSE166423	5-hydroxymethylcytosine is required for terminal differentiation of Purkinje neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	TXT SRA Run Selector	Elitsa Stoyanova	Sep 01, 2021
GSE131902	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	57	BED TXT	Martin Bizet	Jul 16, 2020
GSE131898	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	11	TXT SRA Run Selector	Martin Bizet	Jul 16, 2020
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE120197	A 5' fragment of Xist can sequester the RNA of adjacent genes on chromatin	Expression profiling by high throughput sequencing	Mus musculus	36	TXT SRA Run Selector	Mauro Calabrese	May 07, 2019