GEO Browser - GEO

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148 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Mus musculus		NARROWPEAK
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE121589	Dissecting the Individual and Collective Regenerative Behavior of Muscle Stem Cells During Aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	90	BIGWIG NARROWPEAK TAGALIGN TSV TXT SRA Run Selector	Carlos Aguilar	Aug 30, 2019
GSE262348	NEMO Knockout Drives Variations in Gene Expression Regenerative Trajectory and Induces Chromatin Remodeling in murine muscle satellite cells during healing from traumatic injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BIGWIG NARROWPEAK TSV TXT	Carlos Aguilar	Apr 01, 2024
GSE186907	Regulation of CD8+ T cell differentiation by the transcription factor Bcl11b	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	36	BEDGRAPH BW NARROWPEAK	Dorina Avram	Jun 08, 2023
GSE235651	Identification of endothelial gene regulatory elements during cardiopharyngeal lineage differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Antonio Baldini	Jan 26, 2024
GSE186711	A molecular switch between mammalian MLL complexes dictates response to Menin-MLL inhibition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	72	BW NARROWPEAK	Douglas Barrows	Nov 16, 2022
GSE231567	Altered chromatin occupancy of patient-associated H4 mutants misregulate neuronal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BW NARROWPEAK	Douglas Barrows	Oct 19, 2023
GSE240030	ATRX guards against aberrant differentiation in mesenchymal progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	165	BED BW NARROWPEAK	Douglas Barrows	Mar 13, 2024
GSE157556	Insights into the regulation of the brain-placental axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	42	COV NARROWPEAK	Susanta K. Behura	Aug 27, 2021
GSE122713	scRNA-seq, bulk RNA-seq, and ATAC-seq data from progenitor exhausted and terminally exhausted CD8+ T cells from tumors and chronic viral infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	NARROWPEAK	Kevin Bi	Nov 20, 2018
GSE256299	Conserved helical motifs in the Ikaros IDR mediate NuRD corepressor interaction and transcriptional repression.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	72	BIGWIG BROADPEAK BW NARROWPEAK	LMS Bioinformatics Core	Oct 28, 2024
GSE163932	Serine biosynthesis is a metabolic vulnerability in FLT3-ITD-driven acute myeloid leukaemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	37	BW NARROWPEAK	Stefan Bjelosevic	Jan 13, 2021
GSE240484	AgRP neuron epigenomes across hunger states reveal that IRF3 mediates leptin's effects	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	46	BED BW NARROWPEAK TSV	NORC Boston	Apr 12, 2024
GSE242719	Reversible internalization of cytoplasm into the nucleus in senescent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BROADPEAK BW NARROWPEAK TSV TXT	Dimitrios Botskaris	Sep 12, 2023
GSE132444	Dynamic Lineage Priming by ERK is Driven by Transcription Factor-Independent Enhancer Regulation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	220	BED NARROWPEAK TXT	Josh M Brickman	Aug 08, 2019
GSE193463	HMGNs Regulate White Adipocyte Browning By Stabilizing Cell Identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	NARROWPEAK TAR	Michael Bustin	Oct 19, 2022
GSE222040	Synthetic reversed sequence reveals default chromatin states	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Saccharomyces cerevisiae	112	BW NARROWPEAK	Brendan R. Camellato	Dec 30, 2023
GSE252482	Synthetic reversed sequences reveal default genomic states	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Saccharomyces cerevisiae	160	BW NARROWPEAK	Brendan R. Camellato	Jan 16, 2024
GSE146292	Stepwise chromatin and transcriptional acquisition of an intraepithelial lymphocyte program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BB BED BIGWIG H5 MTX NARROWPEAK TSV SRA Run Selector	Tiago Castro	Jan 04, 2021