GEO Browser - GEO

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152 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE123388	A Preformed Chromatin Architecture Ensures Robust Shh Transcription during Limb Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	54	BEDGRAPH BW	Christina Paliou	May 13, 2019
GSE167487	A Variant in Human AIOLOS Impairs Adaptive Immunity by Interfering with IKAROS	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BEDGRAPH NARROWPEAK TXT SRA Run Selector	Motoi Yamashita	May 01, 2021
GSE138514	A complex regulatory landscape involved in the development of external genitals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH	Ana Rita Amandio Lhopitallier	Apr 25, 2020
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE198775	A genome-wide relay of signalling-responsive enhancers drives hematopoietic specification	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	73	BED BEDGRAPH H5	Peter Keane	Dec 09, 2022
GSE142677	AGO HITS-CLIP Reveals Distinct Patterns of miRNA Regulation of Visceral and Brown Adipose Tissue Identity	Other Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	35	BEDGRAPH CSV SRA Run Selector	Sean O'Connor	Dec 28, 2019
GSE128001	AMPK links acetyl-coA homeostasis to BET recruitment in acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH	Daisuke Nakada	Sep 05, 2019
GSE156855	AP-1 and TGFb cooperativity drives non-canonical Hedgehog signaling in resistant basal cell carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	38	BEDGRAPH	Anthony Oro	Aug 25, 2020
GSE220529	Accelerated DNA replication fork speed due to Loss of R-Loops in Myelodysplastic Syndromes with SF3B1 Mutation	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	131	BEDGRAPH	David Rombaut	Feb 22, 2024
GSE180937	Aire regulates chromatin looping by evicting CTCF from domain boundaries and favoring accumulation of cohesin on super-enhancers	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	33	BEDGRAPH BIGWIG	CBDM Lab	Jul 30, 2021
GSE80708	An ES cell–specific NuRD complex functions through interaction with Wdr5	Expression profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH TXT SRA Run Selector	Thomas Fazzio	Apr 27, 2017
GSE121224	An enhancer in the middle of the Igκ locus orchestrates nuclear architecture to generate a diverse antigen receptor repertoire	Expression profiling by high throughput sequencing	Mus musculus	11	BEDGRAPH SRA Run Selector	Padma Natarajan	Nov 15, 2018
GSE207997	Analysis of Polycomb Repressive Complex 1 subunits across cell cycle in pluripotent cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	53	BEDGRAPH BIGWIG TAR	Jordi Martorell-Marugan	Dec 02, 2022
GSE155102	Arid1a is essential in cardiomyocytes for neonatal heart maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH	Cornelis J. Boogerd	Jul 05, 2023
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE145779	Bcl11b binding and transcriptome analysis of Bcl11b-deficient MAIT cells at steady state and infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BEDGRAPH	Dorina Avram	Mar 22, 2021
GSE176146	Bromodomain protein 9 (BRD9) regulates interferon-stimulated genes during macrophage activation via cooperation with BET protein BRD4	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	104	BEDGRAPH TXT SRA Run Selector	Diana C. Hargreaves	Nov 26, 2021
GSE157139	CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus synthetic construct	138	BEDGRAPH BW HIC NARROWPEAK TXT	Danny Reinberg	Feb 06, 2022
GSE94431	Capturing the onset of PRC2-mediated repressive domain formation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	107	BEDGRAPH BW	Danny Reinberg	Jun 21, 2018