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55885 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TXT
GSE196450	Context-dependent perturbations in chromatin folding and the transcriptome by cohesin and related factors	Expression profiling by high throughput sequencing Other	Homo sapiens	126	BED BW HIC TXT	Ryuichiro Nakato	Jul 28, 2023
GSE179265	Inflammatory molecular endotypes of nasal polyps derived from Caucasian and Japanese populations	Expression profiling by high throughput sequencing	Homo sapiens	24	TXT SRA Run Selector	Tsuguhisa Nakayama	Dec 15, 2021
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE98289	Post-transcriptional remodelling is temporally deregulated during motor neurogenesis in human ALS models	Expression profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Raphaelle Luisier	Mar 08, 2018
GSE98290	Post-transcriptional remodelling is temporally deregulated during motor neurogenesis in human ALS models	Expression profiling by high throughput sequencing	Homo sapiens	35	TXT	Raphaelle Luisier	May 31, 2017
GSE140729	Structure of LINC00511-siRNA-conjugated nanobubbles and improvement of cisplatin sensitivity on triple negative breast cancer	Expression profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Bolin Wu	Sep 03, 2020
GSE122009	A Multiplexed Barcodelet Single-Cell RNA-Seq Approach Elucidates Combinatorial Signaling Pathways that Drive ESC Differentiation	Expression profiling by high throughput sequencing	Mus musculus	20	CSV FA MTX TSV TXT SRA Run Selector	Richard I Sherwood	May 26, 2020
GSE128498	Arabidopsis PP6 phosphatases dephosphorylate PIF proteins to repress photomorphogenesis.	Expression profiling by high throughput sequencing	Arabidopsis thaliana	6	TXT SRA Run Selector	xiaodan yu	Sep 04, 2019
GSE136549	Changes in adenoviral chromatin organization precede early gene activation [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	10	TXT SRA Run Selector	Uwe Schwartz	Apr 24, 2023
GSE210736	Chronic hypoxia remodels the tumor microenvironment to support glioma stem cell growth [scRNAseq+Multiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	39	H5 MTX TSV TXT XLSX	James Nicholson	Apr 03, 2024
GSE119311	Comparative transcriptomics of Aspergillus niger when deleted or overexpressed for the putative transcription factors MjkA, MjkB and the histon deactelyase HdaX	Expression profiling by high throughput sequencing	Aspergillus niger	28	TXT SRA Run Selector	Paul Schäpe	Nov 07, 2018
GSE75549	Determine the effects of Hdac3 deletion on H3K27ac profiles in murine chondrocytes[RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Jennifer Jane Westendorf	Aug 10, 2016
GSE215321	Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters	Expression profiling by high throughput sequencing	Homo sapiens	5	TXT	Maria Valieva	Mar 31, 2023
GSE98427	Epigenetic activation during Th17 cell differentiation is impaired after TRIM28 deletion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF TXT WIG SRA Run Selector	Huiping Lu	Feb 22, 2018
GSE256412	Epigenetic changes regulating the epithelial-mesenchymal transition in human trophoblast differentiation	Expression profiling by high throughput sequencing	Homo sapiens	22	TXT	Nick Illsley	Jul 03, 2024
GSE115357	FBXO11-Mediated Proteolysis of BAHD1 Relieves PRC2-dependent Transcriptional Repression in Erythropoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	50	BW TXT SRA Run Selector	Mitch Weiss	Dec 31, 2020
GSE99155	H3K36me3 protects the mouse epigenome from single nucleotide variations [mRNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Jin Sun	Aug 01, 2019
GSE183212	Human resident memory T cells exit the skin and mediate systemic Th2-driven inflammation.	Expression profiling by high throughput sequencing	Homo sapiens	9	TXT	Georg Stary	Sep 24, 2021
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE65884	PDGFRα+ cells in ESC cultures represent the in vitro equivalent of the pre-implantation primitive endoderm precursors	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Antonio Lo Nigro	Apr 22, 2016