GEO Browser - GEO

Series

Samples

Platforms

DataSets

24 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TSV	Joseph R Ecker
GSE41753	Single-base resolution DNA methylomes of soybean recombinant inbred lines reveals heritability patterns of natural methylation variants	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Glycine max	97	TSV TXT SRA Run Selector	Joseph R Ecker	Jun 04, 2013
GSE43858	Patterns of Population Epigenomic Diversity in Arabidopsis thaliana (RNA-Seq)	Expression profiling by high throughput sequencing	Arabidopsis thaliana	144	TSV SRA Run Selector	Joseph R Ecker	Mar 05, 2013
GSE50191	Maize proteome and transcriptome atlas	Expression profiling by high throughput sequencing	Zea mays	68	TSV SRA Run Selector	Joseph R Ecker	Aug 18, 2016
GSE75868	Molecular Criteria for Defining the Naive Human Pluripotent State	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	PILEUP TSV TXT	Joseph R Ecker	Jul 18, 2016
GSE79310	Functional Haploid Human Oocytes Generated from Polar Body Genomes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8	TSV TXT	Joseph R Ecker	Dec 07, 2016
GSE79709	Unique cell-type specific patterns of DNA methylation in the root meristem (RNA-seq)	Expression profiling by high throughput sequencing	Arabidopsis thaliana	6	TSV SRA Run Selector	Joseph R Ecker	Mar 31, 2016
GSE79710	Unique cell-type specific patterns of DNA methylation in the root meristem	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	15	TSV	Joseph R Ecker	Mar 31, 2016
GSE80744	Epigenomic and genome structural diversity in a worldwide collection of Arabidopsis thaliana	Expression profiling by high throughput sequencing	Arabidopsis thaliana	728	TSV TXT SRA Run Selector	Joseph R Ecker	Jul 14, 2016
GSE82022	Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	18	TAR TSV SRA Run Selector	Joseph R Ecker	Dec 20, 2016
GSE100685	Dynamic methylome remodeling throughout mammalian fetal development	Expression profiling by high throughput sequencing	Mus musculus	61	TSV SRA Run Selector	Joseph R Ecker	Jun 30, 2018
GSE108401	The Complex Architecture of Transgene Insertions	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	39	BW TSV TXT SRA Run Selector	Joseph R Ecker	Mar 16, 2018
GSE122314	Epigenetic Control of a Multifunctional Stress Regulator	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	126	TSV TXT SRA Run Selector	Joseph R Ecker	Aug 19, 2019
GSE139296	PHYTOCHROME INTERACTING FACTORs trigger environmentally responsive chromatin dynamics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	109	BW TSV TXT SRA Run Selector	Joseph R Ecker	Apr 30, 2021
GSE140493	Multi-omic profiling of single nuclei uncovers regulatory diversity of brain cell types and diseases	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	8494	CSV HDF5 TSV SRA Run Selector	Joseph R Ecker	Dec 12, 2019
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE193274	Individual Variability in Human Cell Type Transcriptomes and Epigenomes [OF1A]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	3812	CSV TSV SRA Run Selector	Joseph R Ecker	Dec 13, 2023
GSE193296	Individual Variability in Human Cell Type Transcriptomes and Epigenomes [OF1B]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	3063	CSV TSV SRA Run Selector	Joseph R Ecker	Dec 14, 2023
GSE193299	Individual Variability in Human Cell Type Transcriptomes and Epigenomes [OM1A]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	3047	CSV TSV SRA Run Selector	Joseph R Ecker	Dec 14, 2023
GSE193313	Individual Variability in Human Cell Type Transcriptomes and Epigenomes [YF1B]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	3039	CSV TSV SRA Run Selector	Joseph R Ecker	Dec 13, 2023
GSE193339	Individual Variability in Human Cell Type Transcriptomes and Epigenomes [OM2A]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	3059	CSV TSV SRA Run Selector	Joseph R Ecker	Dec 14, 2023