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1609 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			TAR
GSE19602	Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids.	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Oryza sativa	24	BED TAR SRA Run Selector	guangming he	Jan 20, 2010
GSE20187	Tracing the derivation of embryonic stem cells from the inner cell mass by single cell RNA-seq analysis	Expression profiling by high throughput sequencing	Mus musculus	34	TAR TXT	Catalin Barbacioru	May 10, 2010
GSE22571	Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei	Expression profiling by high throughput sequencing	Trypanosoma brucei	9	TAR SRA Run Selector	Daniel Nilsson	Jun 25, 2010
GSE26754	Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA	Expression profiling by high throughput sequencing	Trypanosoma cruzi	8	TAR SRA Run Selector	Daniel Nilsson	Jan 21, 2011
GSE28040	Accurate Identification of A-to-I RNA editing in human by transcriptome sequencing	Expression profiling by high throughput sequencing	Homo sapiens	2	TAR TXT SRA Run Selector	Gang Li	Sep 21, 2011
GSE36350	DNMT3B7, an aberrant DNMT3B isoform, suppresses growth, induces differentiation, and alters DNA methylation in human neuroblastoma	Expression profiling by high throughput sequencing	Homo sapiens	3	TAR SRA Run Selector	Kelly R Ostler	Oct 05, 2012
GSE39777	Comparison of DNA methylation in human tissues	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	9	BED TAR	Janine LaSalle	Mar 28, 2013
GSE48763	Cohesin-based chromatin interactions enable regulated gene expression within pre-existing architectural compartments.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	13	BED TAR TXT SRA Run Selector	Andre J Faure	Aug 13, 2013
GSE53567	Enhancers implicate new genes in QT interval below GWAS detection threshold	Expression profiling by high throughput sequencing Other	Homo sapiens	3	TAR TXT XLS SRA Run Selector	Xinchen Wang	Oct 10, 2014
GSE59716	Condensin-Driven Remodeling of X-Chromosome Topology during Dosage Compensation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Caenorhabditis elegans	13	TAR	Barbara J. Meyer	Jun 03, 2015
GSE63137	Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BED BW TAR TXT SRA Run Selector	Alisa Mo	Jun 17, 2015
GSE65981	BRD7 overexpression cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TAR TXT	Wei Xiong	Feb 12, 2018
GSE66158	Suppression of NAF-1 in Breast Cancer Cells Reduces their Tumorigenicity by Interfering with Cellular Iron Distribution and Metabolism and Ensuing ROS Formation and Apoptosis	Expression profiling by high throughput sequencing	Homo sapiens	6	TAR TXT SRA Run Selector	Rajeev K. Azad	Feb 05, 2016
GSE67931	Disruption of Na+/H+ exchanger regulatory factor 2 scaffold suppresses colon cancer proliferation	Expression profiling by high throughput sequencing	Homo sapiens	9	TAR TXT SRA Run Selector	Viren Patel	May 05, 2016
GSE71262	Genome-wide maps of PBX3-binding sites and Quantitative Analysis of PBX3-Regulated Transcriptomes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	TAR TXT	haibo Han	Sep 24, 2015
GSE72550	Epigenomic Landscapes of Retinal Rods and Cones	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	33	BW TAR TXT SRA Run Selector	Alisa Mo	Mar 07, 2016
GSE72697	Structural organization of the inactive X chromosome	Expression profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	8	TAR TXT SRA Run Selector	Bryan R Lajoie	Jul 18, 2016
GSE77799	The complex genetics of hypoplastic left heart syndrome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	18	BED TAR	Cecilia W Lo	Apr 13, 2017
GSE78903	A Domestication-Selected Retrotransposon for Quenching Genomic Immunity in Rice	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Oryza sativa	11	FA TAR TXT	yiwen Deng	Mar 08, 2018
GSE80156	A coding sequence-embedded principle governs translational reading frame fidelity	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	7	TAR WIG SRA Run Selector	Ji Wan	Apr 12, 2016