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56356 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			SRA Run Selector
GSE90935	Transcriptome Analyses of Two Hybrid Citrus Cultivars in Seedlings Etiolation	Expression profiling by high throughput sequencing	(Citrus unshiu x Citrus sinensis) x Citrus reticulata Citrus reticulata x Citrus sinensis	18	FASTA XLS SRA Run Selector	bo xiong	Jun 13, 2017
GSE96828	Multi-time series RNA-Seq analysis of Enterobacter lignolyticus SCF1during growth in lignin-amended medium	Expression profiling by high throughput sequencing	[Enterobacter] lignolyticus SCF1	18	TXT SRA Run Selector	Lye Meng Markillie	Feb 13, 2018
GSE75236	Haemophilus ducreyi transcriptome during human infection	Expression profiling by high throughput sequencing	[Haemophilus] ducreyi	4	XLSX SRA Run Selector	Dharanesh Gangaiah	Nov 21, 2015
GSE75237	Transcriptomes of 35000HP, ΔcpxA, ΔcpxR mutant strains of Haemophilus ducreyi in mid-log, transition, and stationary phase	Expression profiling by high throughput sequencing	[Haemophilus] ducreyi	36	XLSX SRA Run Selector	Dharanesh Gangaiah	Nov 21, 2015
GSE75238	RpoE-dependent transcriptomes of Haemophilus ducreyi	Expression profiling by high throughput sequencing	[Haemophilus] ducreyi	24	XLSX SRA Run Selector	Dharanesh Gangaiah	Nov 21, 2015
GSE67202	Transcriptomes of ΔrelAspoT and ΔdksA mutants of Haemophilus ducreyi in mid-log, transition, and stationary phase	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	[Haemophilus] ducreyi 35000HP	36	XLSX SRA Run Selector	Concerta L Holley	Jun 04, 2015
GSE122890	Identification of Absidia orchidis steroid 11β-hydroxylation system and its application in engineering Saccharomyces cerevisiae for one-step biotransformation to produce hydrocortisone	Expression profiling by high throughput sequencing	Absidia caerulea	2	TXT SRA Run Selector	feiyu fan	Nov 06, 2019
GSE93891	Biphasic metabolism and host interaction of a chlamydial symbiont	Expression profiling by high throughput sequencing	Acanthamoeba castellanii Candidatus Protochlamydia amoebophila	13	TXT SRA Run Selector	Lena König	Apr 26, 2017
GSE125876	Symbiont-mediated defense against Legionella pneumophila in amoebae	Expression profiling by high throughput sequencing	Acanthamoeba castellanii Candidatus Protochlamydia amoebophila Legionella pneumophila	22	TXT SRA Run Selector	Lena König	Apr 14, 2019
GSE154179	Legionella pneumophila infection rewires the Acanthamoeba castellanii transcriptome, highlighting a class of sirtuin genes	Expression profiling by high throughput sequencing	Acanthamoeba castellanii	36	CSV SRA Run Selector	Shivani Pasricha	Jul 11, 2020
GSE89387	The complex transcriptional response of Acaryochloris marina to different oxygen levels	Expression profiling by high throughput sequencing	Acaryochloris marina MBIC11017	7	XLSX SRA Run Selector	Miguel A Hernández-Prieto	Feb 19, 2017
GSE51744	University of Manitoba/MGCB2 C thermocellum RNA-seq Experiment	Expression profiling by high throughput sequencing	Acetivibrio thermocellus	6	FPKM_TRACKING SRA Run Selector	Richard Sparling	Oct 26, 2014
GSE74918	Metabolic inhibition of Clostridium thermocellum M1570 by pentose sugars.	Expression profiling by high throughput sequencing	Acetivibrio thermocellus	8	TXT XLSX SRA Run Selector	Dawn Marie Klingeman	Oct 31, 2016
GSE137509	KJC335’s transcriptomic responses to xylose versus cellobiose	Expression profiling by high throughput sequencing	Acetivibrio thermocellus	6	XLSX SRA Run Selector	Albert Tafur Rangel	Sep 17, 2019
GSE87407	Significant gene expression differences between sessile biofilms and planktonic cells of Clostridium thermocellum	Expression profiling by high throughput sequencing	Acetivibrio thermocellus 27405	8	XLSX SRA Run Selector	Dawn Marie Klingeman	Sep 28, 2016
GSE68423	Understanding the Regulatory Networks of Three LacI Transcriptional Repressors in Clostridium thermocellum DSM1313	Expression profiling by high throughput sequencing	Acetivibrio thermocellus DSM 1313	36	TXT SRA Run Selector	Charlotte Wilson	Oct 31, 2015
GSE78219	Comparative transcriptomics of Clostridium thermocellum wild type (Δhpt) and Type I glutamine synthetase (Clo1313_2031) deletion strains using RNA-seq	Expression profiling by high throughput sequencing	Acetivibrio thermocellus DSM 1313	8	TXT XLSX SRA Run Selector	Dawn Marie Klingeman	May 31, 2016
GSE78287	Improved growth of Clostridium thermocellum AG553 via medium supplementation with formate and strain evolution	Expression profiling by high throughput sequencing	Acetivibrio thermocellus DSM 1313	24	TXT XLSX SRA Run Selector	Dawn Marie Klingeman	Jan 31, 2017
GSE100047	Sulfate assimilation in Clostridium thermocellum	Expression profiling by high throughput sequencing	Acetivibrio thermocellus DSM 1313	12	TXT XLSX SRA Run Selector	Dawn Marie Klingeman	Nov 01, 2020
GSE152295	RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bacterial Infections	Expression profiling by high throughput sequencing	Achromobacter xylosoxidans Acinetobacter baumannii Aggregatibacter actinomycetemcomitans Borreliella burgdorferi Burkholderia pseudomallei Campylobacter jejuni Enterococcus faecalis Escherichia coli Francisella tularensis Haemophilus influenzae Helicobacter pylori Klebsiella pneumoniae Legionella pneumophila Listeria monocytogenes Mycobacterium tuberculosis Neisseria gonorrhoeae Neisseria meningitidis Pseudomonas aeruginosa Salmonella enterica Shigella flexneri Staphylococcus aureus subsp. aureus MRSA252 Staphylococcus aureus subsp. aureus MSSA476 Staphylococcus epidermidis Streptococcus agalactiae Streptococcus pneumoniae Streptococcus pyogenes Streptococcus suis Vibrio cholerae Yersinia pseudotuberculosis	1122	TXT SRA Run Selector	Kemal Avican	Apr 23, 2021