GEO Browser - GEO

Series

Samples

Platforms

DataSets

91 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			LOOM
GSE215824	Alveolar epithelial progenitor cells drive lung regeneration via dynamic changes in chromatin topology modulated by lineage-specific Nkx2-1 activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	ARROW LOOM RDS	William Zacharias	Oct 19, 2022
GSE169519	Direct neuronal reprogramming by temporal identity factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED BIGWIG H5 LOOM SF TSV TXT SRA Run Selector	Awais Javed	May 04, 2023
GSE191286	Modeling human extraembryonic mesoderm cells using naive pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BED CSV LOOM TSV	Vincent Pasque	Aug 01, 2022
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE209878	Single-cell multi-omic velocity infers dynamic and decoupled gene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BEDPE LOOM MTX TBI TSV	Joshua Welch	Aug 01, 2022
GSE254944	Renin Regulatory Pathway Inhibition Epigenetically Silences Ren1 (scRNA-Seq)	Expression profiling by high throughput sequencing	Mus musculus	2	BIGWIG H5 LOOM MTX TSV	Jason Paul Smith	Aug 26, 2024
GSE254945	Inhibition of Renin Expression Is Regulated by an Epigenetic Switch From an Active to a Poised State	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	34	BIGWIG H5 LOOM MTX TSV	Jason Paul Smith	Aug 26, 2024
GSE154391	Symmetric inheritance of parental histones governs epigenome maintenance and stem cell identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	388	BW LOOM MTX TSV	Anja Groth	Jun 15, 2023
GSE158797	Disruption of a GATA2, TAL1, ERG regulatory circuit promotes erythroid transition in healthy and leukemic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	19	BW LOOM TSV	Julie Thoms	May 27, 2021
GSE247511	Cadherins modulate the self-organizing potential of gastruloids	Expression profiling by high throughput sequencing Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	83	BW LOOM NARROWPEAK TAR	ALEXANDRE MAYRAN	Jul 18, 2024
GSE132042	Tabula Muris	Expression profiling by high throughput sequencing	Mus musculus	996	CSV H5AD LOOM TAR	Angela Oliveira Pisco	Jun 04, 2019
GSE145609	Defining totipotency using criteria of increasing stringency	Expression profiling by high throughput sequencing	Mus musculus	671	CSV LOOM TXT SRA Run Selector	Vincent Pasque	Oct 13, 2020
GSE149590	Tabula Muris Senis	Expression profiling by high throughput sequencing	Mus musculus	2	CSV H5AD LOOM	Angela Oliveira Pisco	Apr 30, 2020
GSE150150	Transcriptional landscape of fate choices in the sensory lineages	Expression profiling by high throughput sequencing	Mus musculus	14	CSV DATA LOOM RDS TXT SRA Run Selector	Saida Hadjab	Jul 01, 2020
GSE153846	Landscape of Monoallelic DNA Accessibility and Gene Regulatory Networks during Reprogramming to Naive Pluripotency and X Chromosome Reactivation [smart-seq]	Expression profiling by high throughput sequencing	Mus musculus	672	CSV LOOM XLSX SRA Run Selector	Vincent Pasque	Sep 30, 2021
GSE156793	A human cell atlas of fetal gene expression	Expression profiling by high throughput sequencing	Homo sapiens	121	CSV LOOM TXT	Junyue Cao	Nov 01, 2020
GSE157453	T cell receptor is required for differentiation but not maintenance of intestinal CD4+ intraepithelial lymphocytes	Expression profiling by high throughput sequencing Other	Mus musculus	28	CSV FASTA H5 JSON LOOM MTX RDS TSV XLSX SRA Run Selector	Tiago Castro	Oct 02, 2020
GSE157501	Early emergence of T central memory precursors programs clonal dominance during chronic viral infection [scRNAseq]	Expression profiling by high throughput sequencing	Mus musculus	1	CSV LOOM SRA Run Selector	Jonas Mir	Sep 05, 2020
GSE157644	Early emergence of T central memory precursors programs clonal dominance during chronic viral infection	Expression profiling by high throughput sequencing	Mus musculus	17	CSV LOOM	Jonas Mir	Sep 09, 2020
GSE159032	Cellular drivers of injury response and regeneration in the adult zebrafish heart	Expression profiling by high throughput sequencing	Danio rerio	61	CSV H5 LOOM SRA Run Selector	Bo Hu	May 06, 2022