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5929 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BW
GSE235007	Nutrient-driven histone code determines exhausted CD8+ T cell fates	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	54	BIGWIG BW	Shixin Ma	Dec 11, 2024
GSE283701	Multi-tissue proteomics identifies a link between satellite DNA organization and heritable transposon repression in Drosophila	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	12	BW TXT	Madhav Jagannathan	Dec 11, 2024
GSE200514	A Conserved Switch to Less Catalytically Active Polycomb Repressive Complexes in non-dividing cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	46	BW TSV	Evan Healy	Dec 10, 2024
GSE267895	TBP bookmarks and preserves neural stem cell fate memory by orchestrating local chromatin architecture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	49	BW	Yuying Shen	Dec 10, 2024
GSE272281	Polygenic trait SNPs in noncoding genomic regions: using chromatin maps to elucidate potential regulatory mechanisms in blood pressure [RNA-seq]	Expression profiling by high throughput sequencing	Homo sapiens	6	BW CSV	Sridhar Rao	Dec 09, 2024
GSE283797	BCL11A is required for normal erythropoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	74	BW NARROWPEAK	Lance Palmer	Dec 08, 2024
GSE253033	Epigenetic modulation through BRD8 impairs conversion of primed EpiSCs to naïve ESCs	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	50	BW	Andrew P Hutchins	Dec 07, 2024
GSE245173	APE1 regulates the transcription of urea cycle genes through stabilizing DNA G-quadruplexes in lung adenocarcinoma	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	38	BW	Yanhao Yu	Dec 06, 2024
GSE254735	Human cytomegalovirus infection coopts chromatin organization to modulate TEAD1 transcription factor activity [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens	4	BW CSV SF	Matthew Weirauch	Dec 06, 2024
GSE254741	Human cytomegalovirus infection coopts chromatin organization to modulate TEAD1 transcription factor activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	30	BW NARROWPEAK SF TXT	Matthew Weirauch	Dec 06, 2024
GSE266214	Brain microvessel-specific transcriptome profiling after severe cerebral hypoperfusion in mice	Expression profiling by high throughput sequencing	Mus musculus	6	BW	Zengyu Zhang	Dec 06, 2024
GSE281399	ALFIN-like proteins link histone H3K4me3 with H2A ubiquitination and coordinate diverse chromatin modifications in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	75	BW	xinjian He	Dec 06, 2024
GSE259438	Cancer epigenome intervention by in-cell chemical catalysis for histone modification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BW FPKM_TRACKING	Masaki Fukuyo	Dec 04, 2024
GSE278914	A lineage-specific nascent RNA assay unveils principles of gene regulation in tissue biology.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	49	BW TXT	Tudorita Tumbar	Dec 04, 2024
GSE256135	DNA hypomethylation promotes UHRF1- and SUV39H1/H2-dependent crosstalk between H3K18ub and H3K9me3 to reinforce heterochromatin states	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	77	BROADPEAK BW IDAT NARROWPEAK TXT	Scott Rothbart	Dec 03, 2024
GSE261119	BRAF inhibitors promote erythropoiesis and hematopoiesis via paradoxical MAPK activation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BW	Yuelin Deng	Dec 03, 2024
GSE272931	Transcriptomic and Epigenomic Signatures Distinguish High- and Low-Risk Endotypes for Liver Tumor Development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	307	BW	Amrit Koirala	Dec 03, 2024
GSE277748	Viral oncogene manipulates YY1 to alter host 3D genome organization and promote B cell proliferation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	26	BW TXT	Chong Wang	Dec 03, 2024
GSE249738	High-throughput capture of transcription factor-driven chromatin dynamics using PHILO ChIP-seq	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Cannabis sativa Solanum lycopersicum	229	BW CSV RESULTS	Mark Zander	Dec 02, 2024
GSE279150	The phosphatase PP1 sustains global transcription by promoting RNA polymerase II pause release [RNA-seq]	Expression profiling by high throughput sequencing	Homo sapiens	8	BW	Aixia Song	Dec 02, 2024