GEO Browser - GEO

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266 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BROADPEAK
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE56131	Transcription factor Runx1 cooperates with MyoD and c-Jun to regulate the balance of myoblast proliferation/differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	37	BROADPEAK CEL	kfir baruch Umansky	Jul 23, 2015
GSE65520	Dynamic regulation of the histone variant H1.0 contributes to intratumor epigenetic and functional heterogeneity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	BED BROADPEAK NARROWPEAK	Paola Scaffidi	May 01, 2016
GSE67382	BAF controls genome accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Douglas Porter	Nov 12, 2015
GSE71131	The dynamic regulatory genome of Capsaspora owczarzaki and the origin of animal multicellularity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Capsaspora owczarzaki	33	BED BEDGRAPH BROADPEAK NARROWPEAK TXT SRA Run Selector	Arnau Sebe-Pedros	Apr 12, 2016
GSE75188	Ezh2 and Runx1 Mutations Targeted to Early Lymphoid Progenitors Collaborate to Promote Early Thymic Progenitor Leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BROADPEAK NARROWPEAK	Adam Mead	Feb 12, 2018
GSE76922	Comprehensive molecular phenotypic effects of the large deletion on chromosome 22q11.2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	59	BROADPEAK FPKM_TRACKING NARROWPEAK TXT SRA Run Selector	Xianglong Zhang	Sep 05, 2017
GSE76935	Suppression of SWI/SNF component Arid1a promotes mammalian regeneration through chromatin remodeling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BIGWIG BROADPEAK NARROWPEAK XLS	Xuxu Sun	Mar 30, 2016
GSE80240	Distinct changes in transcriptional profiles and epigenetic patterns mediated by EZH2 inhibitors in sensitive and insensitive prostate cancer cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	21	BED BROADPEAK BW	Kexin Xu	Sep 01, 2017
GSE80272	Active and inactive enhancers co-operate to exert localized and long-range control of gene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	94	BED BEDGRAPH BROADPEAK BW TDF	Jane Skok	May 26, 2016
GSE81826	Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	18	BROADPEAK TXT SRA Run Selector	Davide Cittaro	Aug 26, 2016
GSE85631	Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	105	BED BROADPEAK NARROWPEAK	Yen-Sin Ang	Dec 15, 2016
GSE89303	Global transcriptional analysis and genome-wide analysis of chromatin state in extended pluripotent stem cells, primed pluripotent stem cells, and naïve pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BROADPEAK	Hongkui Deng	Apr 06, 2017
GSE90634	SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	78	BED BROADPEAK NARROWPEAK TXT SRA Run Selector	Cigall Kadoch	Sep 25, 2017
GSE91009	Chromatin proteomics reveals novel combinatorial histone modification signatures that mark distinct subpopulations of macrophage enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BROADPEAK BW NARROWPEAK TXT	Tommaso Mari	Sep 05, 2017
GSE93997	Chromatin structure alteration regulates key transcription factor expression during blood cell differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	20	BED BROADPEAK TXT	Yanjian Li	Mar 07, 2018
GSE99680	Estrogen signaling is reprogrammed in breast tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	107	BROADPEAK CSV NARROWPEAK SRA Run Selector	Hari Singhal	May 27, 2019
GSE99986	Low and High Dose Progestins Elicit Distinct Breast Cancer Biology	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	47	BROADPEAK CSV SRA Run Selector	Hari Singhal	Jun 13, 2020
GSE100517	Genome-wide strategies identify downstream target genes of connective tissue-associated transcription factors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Gallus gallus	48	BROADPEAK NARROWPEAK TXT	Mickael Orgeur	Jul 19, 2017
GSE101546	SETDB1 controls T helper cell lineage integrity by repressing endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BROADPEAK TXT SRA Run Selector	Veronique Adoue	Feb 05, 2019