GEO Browser - GEO

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35 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BB
GSE26284	ENCODE Cold Spring Harbor Labs Long RNA-seq	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	84	BAM BB BEDRNAELEMENTS BIGWIG GFF GTF PDF SRA Run Selector	ENCODE DCC	Dec 28, 2010
GSE28562	Genome-wide RNA expression in muscle-enriched embryos across different mutations.	Expression profiling by high throughput sequencing	Caenorhabditis elegans	11	BB BW	Diane E Trout	Jun 22, 2012
GSE28563	HLH-1 binding in muscle-enriched embryos and RNA expression in muscle-enriched embryos across different mutations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	15	BB BW	Diane E Trout	Jun 22, 2012
GSE31234	Dynamic Transformations of Genome-wide Epigenetic Marking and Transcriptional Control Establish T Cell Identity [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	11	BB SRA Run Selector	Jingli A Zhang	Apr 14, 2012
GSE31235	Dynamic Transformations of Genome-wide Epigenetic Marking and Transcriptional Control Establish T Cell Identity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	50	BB	Jingli A Zhang	Apr 14, 2012
GSE32931	ENCODE Cold Spring Harbor Labs Long RNA-seq (hg18)	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	3	BB SRA Run Selector	ENCODE DCC	Oct 13, 2011
GSE42819	The landscape of RNA polymerase II transcription initiation in C. elegans reveals a novel regulatory architecture	Expression profiling by high throughput sequencing Other	Caenorhabditis elegans	5	BB BW SRA Run Selector	Thomas A Down	Mar 29, 2013
GSE53554	PAR-CLIP-seq reveals RNAs directly interacting with CTCF in human transformed cell line U2OS	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	3	BB TXT SRA Run Selector	Danny Reinberg	Mar 18, 2014
GSE77429	Organ-specific gene expression in single differentiating Drosophila embryos	Expression profiling by high throughput sequencing	Drosophila melanogaster	24	BB BW SRA Run Selector	David Molnar	Feb 01, 2017
GSE77634	Enhanced CLIP (eCLIP) enables robust and scalable transcriptome-wide discovery and characterization of RNA binding protein binding sites	Expression profiling by array Expression profiling by high throughput sequencing Other	Homo sapiens	100	BB BED BW CEL	Gene Yeo	Mar 28, 2016
GSE92295	Genetic Redundancy of GATA Factors in Extraembryonic Trophoblast Lineage Ensures Progression of both Pre and Postimplantation Mammalian Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BB BW	Sumedha S Gunewardena	Jan 25, 2017
GSE103225	Transcriptome-pathology correlations predict CSNK1E-mediated TDP-43 phosphorylation in sporadic amyotrophic lateral sclerosis	Expression profiling by high throughput sequencing	Homo sapiens	10	BB BED BW SRA Run Selector	Gene Yeo	Jun 06, 2018
GSE109274	DNA methylation, through DNMT1, has an essential role in the development of gastrointestinal smooth muscle cells and disease	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BB	Seungil Ro	Feb 13, 2018
GSE111576	H2A.Z is dispensable for both basal and activated transcription in post-mitotic mouse muscles	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BB WIG	Christophe Papin	Mar 08, 2019
GSE112479	The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	100	BB BED BW CSV TXT	Bruno Di Stefano	Oct 03, 2019
GSE112782	The RNA helicase DDX6 regulates self-renewal and differentiation of human and mouse stem cells [CLIP-Seq]	Expression profiling by high throughput sequencing Other	Homo sapiens	10	BB BED BW CSV SRA Run Selector	En-Ching Luo	Oct 16, 2019
GSE114713	Comprehensively profiling the chromatin architecture of tissue restricted antigen expression in thymic epithelial cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	340	BB BW SRA Run Selector	Adam Handel	Aug 28, 2018
GSE118716	Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine resistant breast cancer	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	40	BB BW HIC TXT VCF	Joanna Achinger-Kawecka	Dec 11, 2019
GSE130044	Direct full-length RNA sequencing reveals unexpected transcriptome complexity during C. elegans development	Expression profiling by high throughput sequencing	Caenorhabditis elegans	3	BB CSV TXT SRA Run Selector	Runsheng Li	Sep 10, 2019
GSE131160	BEN-solo factors partition active chromatin to ensure proper gene activation in Drosophila	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	59	BB BW XLSX SRA Run Selector	Jiayu Wen	Nov 04, 2019