GEO Browser - GEO

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106 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing			BAM
GSE33782	Transcriptome of normal,paracancerous and cancerous colon tissues based on RNA-seq method	Expression profiling by high throughput sequencing	Homo sapiens	3	BAM TXT SRA Run Selector	qianru ai	Aug 21, 2012
GSE33816	RNA-seq analysis of K562 cells (K562-shX) with stable integration of a tet-inducible shRNA targeting a candidate (X) transcription factor from ENCODE/HudsonAlpha-MyersLab	Expression profiling by high throughput sequencing	Homo sapiens	12	BAM BW GTF SRA Run Selector	Anita Bansal	Dec 01, 2011
GSE29968	RNA Sequencing Analysis Generates Comprehensive Transcriptomic Landscape and Identifies PTK6 as a Novel Tumor Suppressor Gene in Esophageal Squamous Cell Carcinoma	Expression profiling by high throughput sequencing	Homo sapiens	6	BAM SRA Run Selector	Yunjuan Bao	Jun 01, 2012
GSE32424	Identification of a Novel Angiogenesis and Tumor Suppressor Gene Rab25 in Esophageal Squamous Cell Carcinoma	Expression profiling by high throughput sequencing	Homo sapiens	12	BAM TXT SRA Run Selector	Yunjuan Bao	Dec 05, 2012
GSE27994	Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Labeo rohita	2	BAM FASTA	Matthew Baranski	Jan 01, 2013
GSE27243	A Transcriptomic Atlas of Mouse Neocortical Layers	Expression profiling by high throughput sequencing	Mus musculus	19	BAM GTF TSV WIG SRA Run Selector	T Grant Belgard	Aug 24, 2011
GSE17593	Melanoma short-term cultures and cell lines: expression profiling and CNV analyses	Expression profiling by array Genome variation profiling by SNP array Expression profiling by high throughput sequencing	Homo sapiens	41	BAM CEL	Michael Berger	Feb 01, 2010
GSE20156	RNA-Seq of melanoma short-term cultures and cell lines	Expression profiling by high throughput sequencing	Homo sapiens	14	BAM SRA Run Selector	Michael Berger	Feb 04, 2010
GSE28113	Programmed fluctuations in sense/anti-sense transcript ratios drive sexual differentiation in Schizosaccharomyces pombe	Expression profiling by high throughput sequencing	Schizosaccharomyces pombe	19	BAM	Danny Asher Bitton	Dec 20, 2011
GSE33475	The exon junction complex is restricted to a specific subset of splice junctions	Expression profiling by high throughput sequencing	Drosophila melanogaster	3	BAM BED SRA Run Selector	Marco Blanchette	Nov 04, 2014
GSE30554	Integrative Annotation of Human Large Intergenic Non-Coding RNAs Reveals Global Properties and Specific Subclasses	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	9	BAM SRA Run Selector	Nataly Moran Cabili	Aug 28, 2011
GSE34740	K562 polyA RNA-Seq	Expression profiling by high throughput sequencing	Homo sapiens	9	BAM SRA Run Selector	Nataly Moran Cabili	Nov 14, 2012
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE34426	Transcriptome study in rhesus monkey	Expression profiling by high throughput sequencing	Macaca mulatta	5	BAM BED SRA Run Selector	Jia-Yu Chen	Oct 10, 2012
GSE33328	Transcriptomic profiling of a glioblastoma multiforme patient with matched control brain tissue	Expression profiling by high throughput sequencing	Homo sapiens	2	BAM SRA Run Selector	Leslie Y Chen	Oct 30, 2011
GSE29413	DNA methylation and SETDB1/H3K9me3 regulate predominantly distinct sets of genes, retroelements and chimaeric transcripts in mouse ES cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BAM WIG SRA Run Selector	Eric Chuah	May 21, 2011
GSE42413	The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	56	BAM BED BW SRA Run Selector	Justin Cotney	Jul 02, 2013
GSE57369	The chromatin modifier CHD8 targets autism risk genes during human neurodevelopment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BAM BED BW TXT SRA Run Selector	Justin Cotney	Jan 21, 2015
GSE21977	De novo transcriptome sequencing in Anopheles funestus using Illumina RNA-seq technology	Expression profiling by high throughput sequencing Other	Anopheles funestus	1	BAM SRA Run Selector	Jacob Crawford	Dec 01, 2010
GSE29991	Messenger RNA is a functional component of a chromatin insulator complex	Expression profiling by high throughput sequencing	Drosophila melanogaster	31	BAM SRA Run Selector	Ryan Dale	Aug 06, 2013