GEO Browser - GEO

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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing			WIG
GSE150506	KMT9 controls growth and stemness of colorectal cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	72	BED WIG	Christopher Berlin	Nov 29, 2021
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE221259	Global transcriptional landscape of CtBP2 in pancreatic beta cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	10	BED BW WIG	Motohiro Sekiya	Aug 08, 2023
GSE197404	Combinatorial effects on gene expression at the Lbx1/Fgf8 locus resolve Split-Hand/Foot Malformation type 3	Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BEDGRAPH WIG	Giulia Cova	Feb 22, 2023
GSE207058	BORIS/CTCFL epigenetically reprograms clustered CTCF binding sites into alternative transcriptional start sites.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	BEDGRAPH BIGWIG WIG XLSX	Elena Pugacheva	Jan 03, 2024
GSE210817	Outward-oriented sites within clustered CTCF boundaries are key for intraTAD chromatin interactions and gene regulation	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	571	BEDGRAPH FPKM_TRACKING WIG	Xiao Ge	Oct 31, 2023
GSE236182	Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	37	BEDGRAPH BEDPE BIGWIG BW HIC TXT WIG	Sergio Niñerola	Dec 04, 2023
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE154475	MLL3/MLL4 methyltransferase activities control early embryonic development and ESC differentiation in a lineage-selective manner	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	100	BIGWIG TXT WIG SRA Run Selector	Kai Ge	Jan 25, 2023
GSE160605	MED1 is a lipogenesis co-activator required for postnatal adipose expansion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	BIGWIG TXT WIG SRA Run Selector	Kai Ge	Mar 17, 2021
GSE165725	Two enhancers synergistically regulate HoxB genes expressions and retinoic acid-induced early ESCs differentiation through 3D chromatin structure	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BW TXT WIG SRA Run Selector	Niannian Li	Mar 01, 2021
GSE200472	NOTCH-YAP1/TEAD-DNMT1 axis drives hepatocyte reprogramming into intrahepatic cholangiocarcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BW TAB WIG	Shuchang Liu	Jul 25, 2023
GSE200586	Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	174	BW WIG	Luke Thomas Isbel	Apr 29, 2023
GSE200976	H3K27me3 demethylases maintain the transcriptional and epigenomic landscape of the intestinal epithelium.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BW WIG	Klaus H Kaestner	Dec 31, 2022
GSE206408	Dihydrofolate reductase metabolic activity controls neurogenic transitions in the developing human and mouse neocortex	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BW WIG	Alice Davy	Dec 31, 2022
GSE166179	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	1185	CSV H5 SF WIG	Eneritz Agirre	May 21, 2021
GSE193236	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosisn [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus	32	CSV WIG	Eneritz Agirre	Jan 28, 2022
GSE234295	Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	124	MCOOL WIG	Dirk Schuebeler	Mar 11, 2024
GSE276343	Metabolic Reprogramming of Iron Endows the Function of ISCA2-TET Interaction During Peri-implantation Development (EM-Seq)	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Mus musculus	18	RESULTS TXT WIG	Xinyu Wang	Sep 10, 2024
GSE199541	Dissecting the roles of MBD2 isoforms and domains in regulating NuRD complex func-tion during cellular differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	TAB WIG	Tuncay Baubec	May 23, 2023