52 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterPlatform: GPL24247 Remove filterExpression profiling by high throughput sequencing Remove filterHIC
GSE120393
Polycomb Mediated Chromatin Organization Reveals Transcriptional Silencers Required for Embryonic Development
107 Chia-Lin Wei Jan 07, 2020
GSE123670
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming
187 ya wei song Apr 05, 2022
GSE125595
RNA interactions are essential for proper CTCF function
24 Ricardo Saldana-Meyer Sep 12, 2019
GSE125972
A distal super enhancer mediates estrogen-dependent mouse uterine–specific gene transcription of Insulin-like growth factor 1 (Igf1)
38 Sylvia C Hewitt May 08, 2019
GSE130725
H4K20me3 methyltransferase SUV420H2 shapes the three-dimensional chromatin landscape of pluripotent embryonic stem cells
26 Benjamin L Kidder Nov 13, 2020
GSE140363
Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
122 Nishana Mayilaadumveettil Apr 14, 2020
GSE143293
Histone 1 deficiency drives lymphomagenesis through disruption of 3D chromatin architecture
53 Matt Teater Sep 02, 2020
GSE144834
Balancing cohesin eviction and retention prevents aberrant chromosomal interactions, Polycomb-mediated repression, and X-inactivation
94 Andrea June Kriz Mar 15, 2021
GSE153403
CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains
88 Bing Ren Jul 06, 2020
GSE157139
CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters
138 Danny Reinberg Feb 06, 2022
GSE157339
Architectural role of cell-fate-instructive transcription factor MyoD in orchestrating 3D genome organization in muscle cells.
122 Yong Zhang May 01, 2021
GSE159468
Hijacking of transcriptional condensates by endogenous retroviruses
78 Sara Hetzel Mar 30, 2022
GSE162511
Single-cell transcriptome and 3D genome atlas of the developing mouse brain
  • Expression profiling by high throughput sequencing
  • Other
4314 Longzhi Tan Jan 07, 2021
GSE168524
NEURON-SPECIFIC CHROMOSOMAL MEGADOMAIN ORGANIZATION IS ADAPTIVE TO RECENT RETROTRANSPOSON EXPANSIONS
72 Sandhya Chandrasekaran Oct 11, 2021
GSE169121
Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology.
61 Nadine Fournier Jan 21, 2022
GSE171749
SETDB1/NSD dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers
88 Amandine BARRAL Jan 25, 2022
GSE172089
Topologically Associating Domain Boundaries are Required for Normal Genome Function
  • Expression profiling by high throughput sequencing
  • Other
89 Sudha Rajderkar Apr 17, 2023
GSE173597
The spliceosome component Usp39 controls B cell development by regulating immunoglobulin gene rearrangement
  • Expression profiling by high throughput sequencing
  • Other
12 Guixin Ruan Feb 08, 2022
GSE176066
NicE-C efficiently reveals open chromatin associated chromosome interactions at high resolution
32 Zhengyu Luo Jan 18, 2022
GSE178348
TCF-1 mediates 3D genome reconfiguration during T cell development
40 Wenliang Wang Feb 24, 2022