GEO Browser - GEO

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265 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Expression profiling by high throughput sequencing			BED
GSE166477	CD93+ and CD93- HSCs comparison	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BW	Asifa Akhtar	Aug 02, 2021
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE165233	Genetic and epigenetic coordination of cortical interneuron development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	27	BED BW CSV MTX TSV	Kathryn Allaway	Sep 22, 2021
GSE218085	Epigenetically-controlled tumor antigens derived from splice junctions between exons and transposable elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	133	BED BW	Sebastian Amigorena	Nov 22, 2022
GSE194192	The molecular basis of specific functions of Brachyury and Eomes for mesoderm and endoderm lineage specification	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED BIGWIG TXT	Sebastian Arnold	Jul 26, 2023
GSE224702	mouse RNA-seq, human RNA-seq, ATAC-seq, and scRNA-seq analyses data	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	45	BED TXT	Kenichi Asano	Mar 13, 2023
GSE195716	Breast cancer plasticity is restrictedby a LATS1-NCOR1 repressive axis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED	Yael Aylon	Oct 19, 2022
GSE217943	Map active enhancer and gene expression at 6 distinct time of the day	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	72	BED BIGWIG	Akanksha Bafna	Apr 24, 2023
GSE180212	Epithelial memory of resolved inflammation limits tissue damage while promoting pancreatic tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BW NARROWPEAK	Chiara Balestrieri	Sep 17, 2021
GSE169055	Integrative molecular roadmap for reprogramming mouse fibroblasts into induced myogenic stem and progenitor cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	55	BED MTX TSV TXT	Ori Bar-Nur	Jan 06, 2022
GSE197859	A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BED MTX TSV TXT	Iros Barozzi	Apr 26, 2023
GSE171749	SETDB1/NSD dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	88	BED BROADPEAK BW HIC TXT SRA Run Selector	Amandine BARRAL	Jan 25, 2022
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE208142	Maged1 WT and cKO mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus Mus musculus	30	BED TXT	Leonardo Beccari	Sep 30, 2023
GSE253600	ROR2 regulates cellular plasticity in pancreatic neoplasia and adenocarcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	48	BED CSV TBI TSV	Simone Benitz	Jun 17, 2024
GSE150506	KMT9 controls growth and stemness of colorectal cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	72	BED WIG	Christopher Berlin	Nov 29, 2021
GSE188525	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED BW MTX TSV	Anna Bigas	Apr 15, 2024
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022