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3649 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing			TXT
GSE63472	Drop-Seq analysis of P14 mouse retina single-cell suspension	Expression profiling by high throughput sequencing Other	Mus musculus	7	BAM TXT SRA Run Selector	Evan Macosko	May 20, 2015
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE81904	Drop-Seq analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line	Expression profiling by high throughput sequencing	Mus musculus	6	BAM R RDATA TXT SRA Run Selector	Karthik Shekhar	Aug 25, 2016
GSE192486	Identification of TBX3 and shared HAND2-TBX3 target genes in early mouse limb buds	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BB BW TXT	Aimee Zuniga	Dec 31, 2023
GSE60738	Dynamics of gene silencing during X inactivation using allele-specific RNA-Seq	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED TXT WIG SRA Run Selector	Hendrik Marks	Jun 15, 2015
GSE63968	A survey of imprinted gene expression in mouse trophoblast stem cells	Expression profiling by high throughput sequencing	Mus musculus	4	BED TXT SRA Run Selector	J Mauro Calabrese	Feb 24, 2015
GSE67955	The landscape of global-long range interactions in mouse and human blood cell lines mediated by Yy1, GATA1, and CTCF during differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	18	BED TXT SRA Run Selector	Marissa Macchietto	Apr 30, 2019
GSE68582	Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State During Somatic Cell Reprogramming	Other Expression profiling by high throughput sequencing	Mus musculus	20	BED TXT SRA Run Selector	Jennifer E Phillips-Cremins	May 05, 2016
GSE70766	Distinct processes and transcriptional targets underlie CDX2 requirements in intestinal stem cells and differentiated villus cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED BW GTF TXT SRA Run Selector	Ramesh Shivdasani	Sep 15, 2015
GSE73845	Functional characterization of RNA-binding protein IMP2 in primary Glioma cell lines [HTS]	Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	25	BED TXT SRA Run Selector	Tommy Beat Schlumpf	May 12, 2016
GSE73867	Nephron endowment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED TXT WIG	Andrew P McMahon	Jan 31, 2016
GSE74315	Pet-1 Switches Transcriptional Targets Postnatally to Regulate Maturation of Serotonin Neuron Excitability.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED TXT SRA Run Selector	Evan Deneris	Jan 08, 2016
GSE75426	Local compartment changes and regulatory landscape alterations in histone H1-depleted cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	BED TXT SRA Run Selector	Geert Geeven	Nov 30, 2015
GSE76248	MiCEE: a ncRNA-protein complex mediates epigenetic silencing and nucleolus organization	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Mus musculus	12	BED BEDGRAPH TXT SRA Run Selector	Guillermo Barreto	Apr 06, 2018
GSE76934	Reversible transitions between transformed and differentiated states in AML	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH TXT	Ruijie Liu	May 13, 2019
GSE79520	The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	40	BED BEDGRAPH TXT	Aikaterini Nanou	Nov 30, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE84373	Vitamin C and L-Proline antagonistic effects capture alternative states in the pluripotency continuum	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	22	BED TXT	Cristina D'Aniello	Feb 03, 2017
GSE84468	Tumor-derived prostaglandin E2 promotes p50 NF-κB-dependent differentiation of monocytic MDSC.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BIGWIG TXT XLS SRA Run Selector	Viviana Piccolo	May 15, 2020
GSE85251	Postnatal DNA demethylation and its role in tissue maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BED TXT SRA Run Selector	Klaus H Kaestner	May 09, 2018