GEO Browser - GEO

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716 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing			BW
GSE227750	3D genome organization coordinates key regulators of lineage specification in mammary epithelial cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	150	BW MTX TXT	Yunshun Chen	Sep 08, 2023
GSE244952	3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	25	BW TXT XLS XLSX	Guillermo Barreto	Sep 27, 2024
GSE103362	4sU-seq analysis for tethering hnRNPK to Xist lacking of XR-PID	Expression profiling by high throughput sequencing	Mus musculus	6	BW	Guifeng Wei	Dec 08, 2017
GSE99924	4sU-seq analysis of Xist-mediated chromosomal silencing	Expression profiling by high throughput sequencing	Mus musculus	47	BW SRA Run Selector	Guifeng Wei	Dec 08, 2017
GSE69143	7SK-BAF axis controls pervasive transcription at enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	74	BW	Ryan Alexander Flynn	Feb 01, 2016
GSE69142	7SK-BAF axis controls pervasive transcription at enhancers [GRO-Seq]	Expression profiling by high throughput sequencing Other	Mus musculus	8	BW SRA Run Selector	Ryan Alexander Flynn	Feb 01, 2016
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE207565	A Bipartate function of ESRRB integrates signaling over time to balance self-renewal and differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BW TSV	Josh M Brickman	Apr 18, 2023
GSE96998	A Comprehensive Roadmap of the Mammalian Ribo-interactome Connects Metabolism Enzymes with Specialized ER-Ribosomes	Expression profiling by high throughput sequencing Other	Mus musculus	6	BW CSV SRA Run Selector	Gerald Tiu	Jun 01, 2017
GSE133417	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BW MTX NARROWPEAK TSV	Caleb Lareau	Dec 31, 2021
GSE129768	A Long Noncoding RNA, LncMyod, Regulates Myogenic Lineage Progression by Modulating Chromatin Accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BROADPEAK BW	Tom Cheung	Dec 08, 2020
GSE185106	A Mitofusin2-Hif1alpha axis regulates the neonatal-to-adult transition in regenerating muscle	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	BW CSV	Prashant Mishra	Aug 16, 2022
GSE123388	A Preformed Chromatin Architecture Ensures Robust Shh Transcription during Limb Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	54	BEDGRAPH BW	Christina Paliou	May 13, 2019
GSE196946	A Synthetic Lethality Screen Reveals ING5 as a Genetic Dependency of Catalytically Dead Set1A/COMPASS in Mouse Embryonic Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	94	BW	Bercin K Cenik	Mar 28, 2022
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE254090	A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	87	BIGWIG BW RESULTS TAR	Elizabeth C Engle	Aug 06, 2024
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE120655	A critical regulator of Bcl2 revealed by systematic transcript discovery of lncRNAs associated with T-cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW SRA Run Selector	Yasmina Kermezli	Mar 14, 2019
GSE188525	A critical requirement for IκBα in controlling dormancy in Hematopoietic stem cells via retinoic acid during embryonic development	Expression profiling by high throughput sequencing Other	Mus musculus	20	BED BW MTX TSV	Anna Bigas	Apr 15, 2024
GSE101646	A cryptic Tudor domain links BRWD2/PHIP to COMPASS-mediated histone H3K4 methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	84	BW SRA Run Selector	Ali Shilatifard	Nov 02, 2017