GEO Browser - GEO

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212 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing			BIGWIG
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE121547	E-C coupling structural protein junctophilin-2 encodes a stress-adaptive transcription regulator	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	BIGWIG CEL TXT	Long-Sheng Song	Jan 31, 2019
GSE128978	ERG controls B-cell development by promoting Igh V-to-DJ recombination	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BIGWIG CEL	Bo Porse	Nov 24, 2019
GSE71708	Mammalian Heat Shock Response And Mechanisms Underlying Its Genome-wide Transcriptional Regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BIGWIG TXT SRA Run Selector	Dig Bijay Mahat	Mar 01, 2016
GSE71713	Acquired tissue-specific promoter bivalency is a basis for PRC2 necessity in adult somatic cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BIGWIG BW TXT SRA Run Selector	Ramesh Shivdasani	May 20, 2016
GSE72859	Transcriptional heterogeneity and lineage commitment in myeloid progenitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	59	BIGWIG	Ido Amit	Nov 25, 2015
GSE76935	Suppression of SWI/SNF component Arid1a promotes mammalian regeneration through chromatin remodeling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BIGWIG BROADPEAK NARROWPEAK XLS	Xuxu Sun	Mar 30, 2016
GSE79819	Microglia development follows a stepwise program to regulate brain homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	117	BIGWIG	Ido Amit	Jul 13, 2016
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE84468	Tumor-derived prostaglandin E2 promotes p50 NF-κB-dependent differentiation of monocytic MDSC.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BED BIGWIG TXT XLS SRA Run Selector	Viviana Piccolo	May 15, 2020
GSE85157	The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	106	BIGWIG	Ido Amit	Aug 18, 2016
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome	Expression profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	90	BED BIGWIG	Asifa Akhtar	Mar 28, 2017
GSE88745	A hyperdynamic H3.3 nucleosome marks promoter regions in pluripotent embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BIGWIG FPKM_TRACKING SRA Run Selector	Tommy Kaplan	Sep 05, 2017
GSE90533	An HDAC3-PROX1 Corepressor Module Acts on HNF4α to Control Hepatic Triglycerides	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BED BIGWIG XLSX SRA Run Selector	Manashree Damle	Jul 26, 2017
GSE90912	High-fat diet fuels prostate cancer progression by rewiring the metabolome and amplifying the MYC program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	BIGWIG	James Bradner	Aug 21, 2019
GSE92412	Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	194	BEDGRAPH BIGWIG BW	Hendrik G Stunnenberg	Apr 30, 2019
GSE95702	Genomic characterization of murine monocytes reveals C/EBPb dependence of Ly6C-cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	96	BIGWIG TXT	Steffen Jung	May 15, 2017
GSE98004	Bptf maintains chromatin accessibility and the self-renewal capacity of mammary gland stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG	Wesley D. Frey	Jun 13, 2017
GSE98124	Direct Induction of the Three Pre-Implantation Blastocyst Cell Types from Fibroblasts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	63	BED BIGBED BIGWIG TXT SRA Run Selector	Tommy Kaplan	Apr 17, 2019
GSE98971	Single cell RNA-seq identifies a unique microglia type associated with Alzheimer’s disease	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	104	BIGWIG TXT	Ido Amit	Jun 12, 2017