GEO Browser - GEO

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152 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Expression profiling by high throughput sequencing			BEDGRAPH
GSE59176	Prevalent p53 gain-of-function mutants co-opt epigenetic pathways to drive cancer growth	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BEDGRAPH BW TXT SRA Run Selector	Morgan Sammons	Jul 31, 2015
GSE72164	Dynamic reorganization of extremely long-range promoter-promoter interactions between two states of pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	76	BEDGRAPH BEDPE BW TXT SRA Run Selector	Shuang-Yin Wang	Dec 07, 2015
GSE64825	Genome-wide distribution and function of ATP-dependent chromatin remodelers in embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	44	BEDGRAPH BW WIG SRA Run Selector	Matthieu GERARD	Jan 26, 2016
GSE83471	Hierarchical RNA processing is rate limiting for mitochondrial ribosome assembly	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH TXT SRA Run Selector	Stefan J Siira	Aug 04, 2016
GSE79520	The dual role of LSD1 and HDAC3 in STAT5-dependent transcription is determined by protein interactions, binding affinities, motifs and genomic positions.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	40	BED BEDGRAPH TXT	Aikaterini Nanou	Nov 30, 2016
GSE72087	Characterization of chromatin and gene expression changes during fasting in mouse liver	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	50	BEDGRAPH CSV FPKM_TRACKING	Songjoon Baek	Dec 20, 2016
GSE72851	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [ART-seq]	Expression profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Francesco Neri	Feb 25, 2017
GSE72852	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [CAPIP-seq]	Expression profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH SRA Run Selector	Francesco Neri	Feb 25, 2017
GSE72854	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [DECAP-seq]	Expression profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH SRA Run Selector	Francesco Neri	Feb 25, 2017
GSE72855	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies [RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	29	BEDGRAPH SRA Run Selector	Francesco Neri	Feb 25, 2017
GSE72856	Intragenic DNA methylation prevents cryptic transcription initiations on gene bodies	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH	Francesco Neri	Feb 25, 2017
GSE97148	Clonally stable Vκ allelic choice instructs Igκ repertoire	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	32	BEDGRAPH TXT SRA Run Selector	Yehudit Bergman	Apr 01, 2017
GSE85505	KAT–independent gene regulation by Tip60 promotes ESC self-renewal but not pluripotency	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BEDGRAPH SRA Run Selector	Thomas Fazzio	Apr 06, 2017
GSE80708	An ES cell–specific NuRD complex functions through interaction with Wdr5	Expression profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH TXT SRA Run Selector	Thomas Fazzio	Apr 27, 2017
GSE98063	Mll3 and Mll4 facilitate enhancer RNA synthesis and transcriptional elongation from promoters independently of H3K4 monomethylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	48	BEDGRAPH BW CSV SRA Run Selector	Kristel Dorighi	May 05, 2017
GSE98140	SET1A/COMPASS and shadow enhancers in the regulation of homeotic gene expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	193	BEDGRAPH BW SRA Run Selector	Ali Shilatifard	May 09, 2017
GSE82199	LTR-retrotransposon control by tRNA-derived small RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	54	BEDGRAPH TXT SRA Run Selector	Robert A Martienssen	Jun 29, 2017
GSE98689	MicroRNAs-143 and -145 induce epithelial to mesenchymal transition by enhancing TGF-β signaling and modulating the expression of junction proteins	Expression profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Danny Incarnato	Jul 19, 2017
GSE84164	Derivation of ground-state female ESCs maintaining gamete-derived DNA methylation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	88	BEDGRAPH TXT SRA Run Selector	Yasuhiro Yamada	Jul 27, 2017
GSE95664	Differential programming of intestinal tissues in SETD2-/- mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BEDGRAPH BW TXT	Ni Li	Sep 01, 2017