GEO Browser - GEO

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49 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Expression profiling by high throughput sequencing			TSV
GSE80280	3D structures of individual mammalian genomes reveal principles of nuclear organization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED HDF5 PDB TSV TXT XYZ SRA Run Selector	Andre J Faure	Mar 07, 2017
GSE118121	Chemical nucleoside conversion-based measurement of RNA stability by targeted and untargeted mRNA 3´ end sequencing	Expression profiling by high throughput sequencing	Mus musculus	14	BED FA TSV SRA Run Selector	Brian Reichholf	Dec 31, 2019
GSE143271	An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	49	BED BROADPEAK BW TSV	Ross Hardison	Jan 08, 2020
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE242974	The role of SMC3 in heart development by regulating super-enhancer associated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BED BEDGRAPH BW MTX TSV XLS XLSX	bowen zhang	Sep 14, 2023
GSE260914	ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78	BED BW HIC MCOOL TSV TXT	Mikhail Magnitov	Mar 08, 2024
GSE194253	Thymic epithelial cells co-opt lineage-defining transcription factors to eliminate autoreactive T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	82	BIGWIG MTX TSV TXT	CBDM Lab	Jun 16, 2022
GSE125831	MAPCap enables high-resolution detection and differential expression analysis of transcription start sites	Expression profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	34	BW TSV SRA Run Selector	Asifa Akhtar	Jun 04, 2019
GSE144718	Gene regulation by gonadal hormone receptors defines brain sex differences	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	95	BW NARROWPEAK TSV	Melody Wu	Apr 20, 2022
GSE193733	Clonal lineage tracing reveals shared origin of conventional and plasmacytoid dendritic cells	Expression profiling by high throughput sequencing Other	Mus musculus	112	BW MTX TSV TXT	Alireza Khodadadi-Jamayran	Feb 16, 2022
GSE125890	mRNA destabilization by BTG1 and BTG2 maintains T cell quiescence	Expression profiling by high throughput sequencing Other	Mus musculus	10	CSV TSV TXT	Jaechul Lim	Jan 31, 2020
GSE145922	IL-23 promotes a coordinated B-cell germinal center program for class-switch recombination to IgG2b in BXD2 mice	Expression profiling by high throughput sequencing Other	Mus musculus	10	CSV MTX TSV SRA Run Selector	Min Gao	May 14, 2020
GSE154634	Coupled analysis of transcriptional states and somatic hypermutation in germinal center B cells reveals role for oxidative phosphorylation in positive selection	Expression profiling by high throughput sequencing Other	Mus musculus	22	CSV FASTA TSV SRA Run Selector	Heping Xu	Apr 16, 2021
GSE157453	T cell receptor is required for differentiation but not maintenance of intestinal CD4+ intraepithelial lymphocytes	Expression profiling by high throughput sequencing Other	Mus musculus	28	CSV FASTA H5 JSON LOOM MTX RDS TSV XLSX SRA Run Selector	Tiago Castro	Oct 02, 2020
GSE158896	Single-cell lineage mapping of a diverse virus-specific naïve CD4 T cell repertoire	Expression profiling by high throughput sequencing	Mus musculus	10	CSV MTX TSV SRA Run Selector	Weiguo Cui	Nov 10, 2020
GSE173769	Single-cell atlas reveals meningeal leukocyte heterogeneity in the developing mouse brain	Expression profiling by high throughput sequencing Other	Mus musculus	12	CSV MTX TSV SRA Run Selector	Xiaoyang Wang	Jul 23, 2021
GSE181526	Single cell analysis of meningeal ectopic lymphoid tissue and lumbar lymph nodes in a spontaneous EAE model	Expression profiling by high throughput sequencing	Mus musculus	16	CSV MTX TSV SRA Run Selector	Gildas Lepennetier	Nov 01, 2023
GSE182320	Single-cell gene expression of virus-specific CD4 T cells in response to acute and chronic infection	Expression profiling by high throughput sequencing Other	Mus musculus	16	CSV FASTA H5SEURAT MTX TSV SRA Run Selector	Thomas Ciucci	Sep 21, 2021
GSE196417	Newly recruited intraepithelial Ly6A+CCR9+CD4+ T cells protect against enteric viral infection	Expression profiling by high throughput sequencing Other	Mus musculus	13	CSV TSV	Roham Parsa	May 26, 2022
GSE206561	A ketogenic diet can revert acquired resistance to immunotherapy in prostate cancer through β-hydroxybutyrate-mediated inhibition of histone deacetylases	Expression profiling by high throughput sequencing Other	Mus musculus	6	CSV MTX TSV TXT	Xin Lu	Feb 13, 2024