GEO Browser - GEO

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56 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Expression profiling by high throughput sequencing			BW
GSE43390	Pausing of RNA polymerase II regulates mammalian developmental potential	Expression profiling by high throughput sequencing Other	Mus musculus	12	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 12, 2015
GSE62151	Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH BW WIG SRA Run Selector	Karen Adelman	Jun 23, 2015
GSE125831	MAPCap enables high-resolution detection and differential expression analysis of transcription start sites	Expression profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	34	BW TSV SRA Run Selector	Asifa Akhtar	Jun 04, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE142315	Induction of Recurrent Break Cluster Genes in Neural Progenitor Cells Differentiated from Embryonic Stem Cells In Culture	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	116	BW	Frederick W Alt	Jan 11, 2020
GSE230605	Contribution of IGCR1 and 3' CBE Super Anchor to Developmental Regulation of Igh V(D)J Recombination	Expression profiling by high throughput sequencing Other	Mus musculus	132	BEDGRAPH BW TXT	Frederick Alt	May 30, 2023
GSE206094	ISL1 controls pancreatic alpha cell fate and regulates beta cell differentiation and maturation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	BW	Šárka Benešová	Jun 17, 2022
GSE212084	NEUROD1 is critical for the initial cell identity determination and differentiation of the endocrine progenitors in the pancreas.	Expression profiling by high throughput sequencing Other	Mus musculus	13	BW	Šárka Benešová	Aug 17, 2023
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170	BED BEDGRAPH BW HIC TXT SRA Run Selector	Meinrad Busslinger	Jul 01, 2020
GSE214869	Enhancers of the PAIR4 regulatory module promote distal VH gene recombination at the Igh locus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	59	BW TXT	Meinrad Busslinger	May 01, 2023
GSE97669	Promoter of lncRNA gene PVT1 is a tumor suppressor DNA element	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	267	BW NARROWPEAK TXT	Howard Y. Chang	May 31, 2018
GSE69887	PAR-TERRA RNA directs homologous sex chromosome pairing	Other Expression profiling by high throughput sequencing	Mus musculus	25	BW WIG SRA Run Selector	Hsueh-Ping Chu	Jul 10, 2017
GSE163365	Targeting BMI-1 in B cells restores effective humoral immune responses and controls chronic viral infection	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	28	BW	Andrea Di Pietro	Oct 11, 2021
GSE67516	A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	42	BED BW TXT XLS XLSX SRA Run Selector	John Edward Froberg	Jun 19, 2015
GSE116649	Megadomains and superloops form dynamically during X-chromosome inactivation but are dispensable for silencing and escape	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	65	BED BEDGRAPH BW HIC XLS XLSX SRA Run Selector	John Edward Froberg	Oct 31, 2018
GSE60077	Length-dependent gene misregulation in Rett syndrome	Expression profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	38	BW CEL TXT	Harrison Wren Gabel	Mar 12, 2015
GSE172088	HDAC1 and PRC2 mediate combinatorial control in SPI1/PU.1-dependent gene repression in murine erythroleukaemia.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	69	BED BW	Christel GUILLOUF	Jul 24, 2022
GSE143271	An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	49	BED BROADPEAK BW TSV	Ross Hardison	Jan 08, 2020
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021