GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Expression profiling by high throughput sequencing			BED
GSE252839	Nuclear Factor NFAT5 Governs Cellular Plasticity-Induced KRAS-Targeted Therapy Resistance in Pancreatic Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BED BW CSV MTX TSV TXT	Pingping Hou	Oct 09, 2024
GSE260914	ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	78	BED BW HIC MCOOL TSV TXT	Mikhail Magnitov	Mar 08, 2024
GSE214438	Age-associated chromatin re-organization in progenitor B cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	76	BED BEDPE TXT	Yaqiang Cao	Mar 01, 2024
GSE240074	GLIS3	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	63	BED BIGWIG	Hong Soon Kang	Dec 31, 2023
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE242974	The role of SMC3 in heart development by regulating super-enhancer associated genes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BED BEDGRAPH BW MTX TSV XLS XLSX	bowen zhang	Sep 14, 2023
GSE151747	eiCLIP analysis of RBFOX2 in primary mouse hepatocytes	Expression profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH SRA Run Selector	LMS Bioinformatics Core	Sep 26, 2022
GSE211864	Probing cell identity hierarchies by fate titration and collision during direct reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	16	BED BIGWIG BROADPEAK H5 LOOM TSV	Bob Hersbach	Sep 16, 2022
GSE173403	Allele-specific differential regulation of monoallelically expressed autosomal genes in the cardiac lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED CSV	Gayan Indhu Balasooriya	Aug 22, 2022
GSE172088	HDAC1 and PRC2 mediate combinatorial control in SPI1/PU.1-dependent gene repression in murine erythroleukaemia.	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	69	BED BW	Christel GUILLOUF	Jul 24, 2022
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE160325	Identification of LARP1 targets in naive CD4 T cells [eCLIP]	Expression profiling by high throughput sequencing	Mus musculus	12	BED BEDGRAPH SRA Run Selector	Alison Galloway	May 13, 2021
GSE160328	RNMT regulates the CD4 T cell transcriptome and translatome	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	46	BED BEDGRAPH TAB	Alison Galloway	May 13, 2021
GSE140975	Wapl repression by Pax5 promotes loop extrusion and V gene recombination at the Igh locus	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	170	BED BEDGRAPH BW HIC TXT SRA Run Selector	Meinrad Busslinger	Jul 01, 2020
GSE131154	Fidelity of translation initiation is required for coordinated respiratory complex assembly	Expression profiling by high throughput sequencing Other	Mus musculus	8	BED WIG SRA Run Selector	Stefan J Siira	Jan 13, 2020
GSE143271	An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	49	BED BROADPEAK BW TSV	Ross Hardison	Jan 08, 2020
GSE118121	Chemical nucleoside conversion-based measurement of RNA stability by targeted and untargeted mRNA 3´ end sequencing	Expression profiling by high throughput sequencing	Mus musculus	14	BED FA TSV SRA Run Selector	Brian Reichholf	Dec 31, 2019
GSE124596	A conserved noncoding locus modulates random monoallelic Xist expression across a TAD boundary	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	56	BED BEDGRAPH BW CSV TXT SRA Run Selector	Nicolas Servant	Dec 01, 2019
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019