GEO Browser - GEO

Series

Samples

Platforms

DataSets

8431 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by high throughput sequencing
GSE57773	Discovery of ethanol responsive small RNAs in Zymomonas mobilis	Non-coding RNA profiling by high throughput sequencing	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821	2	TXT SRA Run Selector	Seung Hee Cho	May 20, 2014
GSE28755	Comparative sequence analysis of plant small RNAs	Non-coding RNA profiling by high throughput sequencing	Zostera marina Zea mays Volvox carteri Vitis vinifera Triticum aestivum Sorghum bicolor Solanum tuberosum Solanum lycopersicum Silene latifolia Setaria italica Populus trichocarpa Picea abies Petunia x hybrida Persea americana Panicum virgatum Nuphar advena Nicotiana tabacum Musa acuminata Miscanthus x giganteus Marsilea quadrifolia Lactuca sativa Hordeum vulgare Gossypium arboreum Ginkgo biloba Erythranthe guttata Cycas rumphii Cucurbita maxima Citrus sinensis Chlamydomonas reinhardtii Chara corallina Carica papaya Capsicum annuum Aristolochia fimbriata Amborella trichopoda	99	TXT	Emanuele De Paoli	May 10, 2011
GSE32480	High-throughput sequencing of small RNAs in Zostera marina	Non-coding RNA profiling by high throughput sequencing	Zostera marina	3	TXT	Emanuele De Paoli	Sep 30, 2011
GSE148762	Small RNAs in monocots	Non-coding RNA profiling by high throughput sequencing	Zostera marina Zea mays Tradescantia fluminensis Streptochaeta angustifolia Sorghum bicolor Setaria viridis Sagittaria montevidensis Raddia brasiliensis Prosthechea radiata Phyllostachys edulis Phoenix dactylifera Pharus parvifolius Phalaenopsis equestris Oryza glaberrima Nymphaea colorata Musa acuminata var. zebrina Musa acuminata AAA Group Musa ABB Group Liriope muscari Lemna gibba Kniphofia uvaria Hemerocallis lilioasphodelus Goudaea ospinae Freycinetia cumingiana Elaeis guineensis Echinodorus uruguayensis Cyperus alternifolius Colocasia esculenta Cocos nucifera Canna indica Anomochloa marantoidea Ananas comosus Acorus calamus	195	TXT SRA Run Selector	Blake C. Meyers	Apr 17, 2020
GSE116095	Identification of Exosome-Like Nanoparticle Derived MicroRNAs from Eleven Edible Plants	Non-coding RNA profiling by high throughput sequencing	Zingiber officinale Vaccinium Solanum lycopersicum Pyrus Pisum sativum Glycine max Cucumis melo Cocos nucifera Citrus x paradisi Citrus reticulata Actinidia chinensis	11	TXT XLSX SRA Run Selector	Juan Xiao	Jun 25, 2018
GSE153126	Profile of micro-RNA in ginger-derived nanoparticles	Non-coding RNA profiling by high throughput sequencing	Zingiber officinale	3	XLSX SRA Run Selector	Huang-Ge Zhang	May 19, 2021
GSE155050	MicroRNAs differential expression under submergence, drought and alternated stress in maize and teosinte	Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. parviglumis Zea mays subsp. mays	8	TXT XLSX SRA Run Selector	Blanca Estela Barrera-Figueroa	Oct 23, 2020
GSE254490	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication [TIL11 RNA]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. parviglumis	26	NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE254496	MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. parviglumis Zea mays	226	BROADPEAK BW NARROWPEAK TXT	Jonathan Cahn	Feb 23, 2024
GSE254581	Premeiotic 24-nt phasiRNAs are present in the Zea genus and unique in biogenesis mechanism and molecular function [small_RNA]	Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. parviglumis Zea mays subsp. mexicana Zea mays subsp. mays Zea luxurians	69	TXT	Junpeng Zhan	May 15, 2024
GSE254584	Premeiotic 24-nt phasiRNAs are present in the Zea genus and unique in biogenesis mechanism and molecular function.	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Zea mays subsp. parviglumis Zea mays subsp. mexicana Zea mays subsp. mays Zea luxurians	216	TSV	Junpeng Zhan	May 14, 2024
GSE234924	Teosinte Pollen Drive guides maize domestication and evolution by RNA interference [small RNA-seq]	Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. mays x Zea mays subsp. mexicana	20	BW TXT	Robert A Martienssen	Jul 26, 2023
GSE234925	Teosinte Pollen Drive guides maize domestication and evolution by RNA interference	Other Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. mays x Zea mays subsp. mexicana	433		Robert A Martienssen	Jul 25, 2023
GSE52293	Spatiotemporal and cell-type dependent phasiRNA biogenesis in maize male reproduction (small RNA-seq)	Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. mays Zea mays	89	TXT SRA Run Selector	Blake C. Meyers	Feb 11, 2015
GSE52318	Spatiotemporal and cell-type dependent phasiRNA biogenesis in maize male reproduction	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. mays Zea mays	100	TXT	Blake C. Meyers	Feb 11, 2015
GSE76798	Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in Plants (I)	Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. mays Oryza sativa Japonica Group Arabidopsis thaliana	4	GTF SRA Run Selector	Dong Wang	Jan 21, 2017
GSE254583	Premeiotic 24-nt phasiRNAs are present in the Zea genus and unique in biogenesis mechanism and molecular function [TraPR small RNA-seq]	Other Non-coding RNA profiling by high throughput sequencing	Zea mays subsp. mays	11	TXT	Junpeng Zhan	May 15, 2024
GSE12173	Small RNA SBS signatures identified from maize using Illumina's SBS technology	Non-coding RNA profiling by high throughput sequencing	Zea mays	2		Blake C. Meyers	Oct 01, 2008
GSE15286	Epigenetic modifications and their relationships to smRNA and mRNA transcriptomes in maize	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Zea mays	14	BED FA TXT SRA Run Selector	Xiangfeng Wang	Apr 28, 2009
GSE17339	High-throughput sequencing of small RNAs in Zea mays (maize)	Non-coding RNA profiling by high throughput sequencing	Zea mays	3	SRA Run Selector	Emanuele De Paoli	Dec 31, 2009