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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Non-coding RNA profiling by high throughput sequencing	Homo sapiens
GSE206859	LDL delivery of microbial small RNAs drives atherosclerosis through macrophage TLR8	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	50	TXT	Ryan M Allen	Jun 25, 2022
GSE147966	Estrogen-driven control of diabetogenic gene networks is associated with reduced levels of miR-224/452 circulating in extracellular vesicles	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	32		Roel Bijkerk	Dec 01, 2020
GSE106764	Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	80	BOWTIE SRA Run Selector	Franziska Bonath	Oct 22, 2018
GSE145051	Reproductive tract extracellular vesicles are sufficient to transmit intergenerational stress and program neurodevelopment	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	132	CSV SRA Run Selector	Jennifer Chan	Feb 11, 2020
GSE104823	YAP/TAZ initiates gastric tumorigenesis via upregulation of MYC	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	8		Wonyoung Choi	Apr 23, 2018
GSE235136	Trimannose-coupled antimiR-21 for macrophage-targeted inhalation treatment of acute inflammatory lung damage	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	151	CSV TXT	Stefan Engelhardt	Jul 12, 2023
GSE169020	MapToCleave: high-throughput profiling of microRNA biogenesis in living cells	Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	56	TXT SRA Run Selector	Marc Riemer Friedländer	Nov 16, 2021
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE155643	Pten and Dicer1 loss in the mouse uterus causes poorly-differentiated endometrial adenocarcinoma	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	36	TSV SRA Run Selector	Shannon Hawkins	Aug 03, 2021
GSE138358	Enhancers predominantly control transcription initiation [scaRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	13		Martin Stephen Charles Larke	Feb 03, 2021
GSE138359	Enhancers predominantly control transcription initiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	45		Martin Stephen Charles Larke	Feb 03, 2021
GSE150076	METTL1-mediated m7G tRNA modification drives oncogenic transformation	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	26		Qi Liu	Oct 01, 2020
GSE82199	LTR-retrotransposon control by tRNA-derived small RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	54	BEDGRAPH TXT SRA Run Selector	Robert A Martienssen	Jun 29, 2017
GSE151517	A ubiquitin ligase mediates target-directed microRNA decay independently of tailing and trimming	Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	46		Joshua Mendell	Nov 12, 2020
GSE158025	A ubiquitin ligase mediates target-directed microRNA decay independently of tailing and trimming [small RNA-seq]	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	18	XLSX SRA Run Selector	Joshua Mendell	Nov 13, 2020
GSE150107	miR-200b/200a/429 cluster prevents metastasis and induces dormancy in murine claudin-low mammary tumor cells	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	48	TXT	Roger Moorehead	May 08, 2020
GSE188212	Comprehensive microRNA analysis across genome-edited colorectal cancer organoid models reveals miR-24 as a candidate regulator of cell survival	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	58	CSV SRA Run Selector	Praveen Sethupathy	Nov 15, 2022
GSE144063	Identification of mecciRNAs and their roles in the mitochondrial entry of proteins	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	16	BED TXT SRA Run Selector	Ge Shan	Jan 23, 2020
GSE221261	Aberrant miR-29 is a predictive feature of severe phenotypes in pediatric Crohn’s disease	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	CSV	Shehzad Sheikh	Dec 23, 2022
GSE248321	Lysine tRNA fragments and miR-194-5p co-regulate hepatic steatosis via β-Klotho and Perilipin 2	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	72		Yonat Tzur	Jan 31, 2024