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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Non-coding RNA profiling by high throughput sequencing	Homo sapiens
GSE151517	A ubiquitin ligase mediates target-directed microRNA decay independently of tailing and trimming	Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	46		Joshua Mendell	Nov 12, 2020
GSE158025	A ubiquitin ligase mediates target-directed microRNA decay independently of tailing and trimming [small RNA-seq]	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	18	XLSX SRA Run Selector	Joshua Mendell	Nov 13, 2020
GSE221261	Aberrant miR-29 is a predictive feature of severe phenotypes in pediatric Crohn’s disease	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	21	CSV	Shehzad Sheikh	Dec 23, 2022
GSE188212	Comprehensive microRNA analysis across genome-edited colorectal cancer organoid models reveals miR-24 as a candidate regulator of cell survival	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	58	CSV SRA Run Selector	Praveen Sethupathy	Nov 15, 2022
GSE138359	Enhancers predominantly control transcription initiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	45		Martin Stephen Charles Larke	Feb 03, 2021
GSE138358	Enhancers predominantly control transcription initiation [scaRNA-seq]	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	13		Martin Stephen Charles Larke	Feb 03, 2021
GSE147966	Estrogen-driven control of diabetogenic gene networks is associated with reduced levels of miR-224/452 circulating in extracellular vesicles	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	32		Roel Bijkerk	Dec 01, 2020
GSE194266	Ex vivo reconstitution of fetal oocyte development in humans and cynomolgus monkeys	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Macaca fascicularis Mus musculus	320	MTX TSV TXT	Yukihiro Yabuta	Aug 01, 2022
GSE223151	Extracellular microRNA: Novel Biomarker and Potential Therapeutic Target in Trauma	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	35	TXT	Brittney Williams	Mar 22, 2023
GSE140887	Gut microbiota regulates tumor via circRNA/miRNA networks	Non-coding RNA profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	33	GPR TXT	X XX	Oct 13, 2020
GSE199346	High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	87	TSV	Chenghang Zong	Nov 30, 2022
GSE144063	Identification of mecciRNAs and their roles in the mitochondrial entry of proteins	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Danio rerio Homo sapiens Mus musculus	16	BED TXT SRA Run Selector	Ge Shan	Jan 23, 2020
GSE206859	LDL delivery of microbial small RNAs drives atherosclerosis through macrophage TLR8	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	50	TXT	Ryan M Allen	Jun 25, 2022
GSE82199	LTR-retrotransposon control by tRNA-derived small RNA	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	54	BEDGRAPH TXT SRA Run Selector	Robert A Martienssen	Jun 29, 2017
GSE248321	Lysine tRNA fragments and miR-194-5p co-regulate hepatic steatosis via β-Klotho and Perilipin 2	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	72		Yonat Tzur	Jan 31, 2024
GSE174492	METTL1 promotes hepatocarcinogenesis via m7G tRNA modification dependent translation control	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	26	TXT SRA Run Selector	Wanjie Zhu	Jun 26, 2021
GSE150076	METTL1-mediated m7G tRNA modification drives oncogenic transformation	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	26		Qi Liu	Oct 01, 2020
GSE169020	MapToCleave: high-throughput profiling of microRNA biogenesis in living cells	Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	56	TXT SRA Run Selector	Marc Riemer Friedländer	Nov 16, 2021
GSE106764	Next-generation sequencing reveals two populations of damage-induced small RNAs at endogenous DNA double-strand breaks	Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	80	BOWTIE SRA Run Selector	Franziska Bonath	Oct 22, 2018
GSE113992	Non-coding regions are the main source of tumor-specific antigens	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens Mus musculus	15	TSV	Krystel Vincent	Oct 18, 2018